Detail information of GWHGAAEX011369/evm.TU.scaffold_37.122


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|430748071|ref|YP_007207200.1|1.00E-06oxalate decarboxylase family bicupin [Singulisphaera acidiphila DSM 18658]
nrgi|695081635|ref|XP_009388348.1|6.31E-68PREDICTED: germin-like protein 3-8 [Musa acuminata subsp. malaccensis]
Swissprottr|Q10BU2|GL37_ORYSJ1.00E-62Germin-like protein 3-7 (Precursor)
trEMBLtr|M5WNE5|M5WNE5_PRUPE2.00E-62Uncharacterized protein {ECO:0000313|EMBL:EMJ10803.1}
TAIRAT1G189702.00E-54germin-like protein 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004331324163133547-
Transcript Sequence

Network for GWHGAAEX011369

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00190.21Cupin_1662011.50E-39
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0030145Molecular Functionmanganese ion binding
GO:0045735Molecular Functionnutrient reservoir activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.560
SRR2545915Juvenile tuber18.890
SRP108465SRR5643513five period of Gastrodia elata50.580
SRR5643514five period of Gastrodia elata21.610
SRR5643515five period of Gastrodia elata48.920
SRR5643524five period of Gastrodia elata41.440
SRR5643525five period of Gastrodia elata415.290
SRR5643528five period of Gastrodia elata448.600
SRR5643658five period of Gastrodia elata1132.990
SRR5643659five period of Gastrodia elata6.790
SRR5643660five period of Gastrodia elata5.070
SRR5643661five period of Gastrodia elata4.040
SRR5643662five period of Gastrodia elata4.120
SRR5643663five period of Gastrodia elata3.570
SRR5643664five period of Gastrodia elata1.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.600
SRR6049655Rhizomagastrodiae_C368-T10_good_124.060
SRR6049656Rhizomagastrodiae_C368-T07_good_113.020
SRR6049657Rhizomagastrodiae_C368-T07_good_17.020
SRR6049658Rhizomagastrodiae_C368-T04_good_111.160
SRR6049659Rhizomagastrodiae_C368-T04_good_113.620
SRR6049660Rhizomagastrodiae_C368-T01_good_110.360
SRR6049661Rhizomagastrodiae_C368-T04_good_123.580
SRR6049662Rhizomagastrodiae_C368-T01_good_120.320
SRR6049663Rhizomagastrodiae_C368-T01_good_117.060
SRR6049664Rhizomagastrodiae_C368-T10_good_116.410
SRR6049665Rhizomagastrodiae_C368-T10_good_116.410
SRP279888GastroGastrodia elata tuber 21.42
JuvenJuvenile tuber2.44
Mother_GastroMother tuber of Gastrodia elata 154.68
Mother_JuvenMother tuber of Juvenile 61.25