Detail information of GWHGAAEX011371/evm.TU.scaffold_37.125


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|147678757|ref|YP_001212972.1|2.00E-11arabinose efflux permease [Pelotomaculum thermopropionicum SI]
nrgi|604305262|gb|EYU24441.1|0hypothetical protein MIMGU_mgv1a020189mg, partial [Erythranthe guttata]
trEMBLtr|M0SYM4|M0SYM4_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P14950_001}
TAIRAT1G747800Nodulin-like / Major Facilitator Superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004332315323245306-
Transcript Sequence

Network for GWHGAAEX011371

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06813.12Nodulin-like112571.80E-68
PF07690.15MFS_13024967.10E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0005887Cellular Componentintegral component of plasma membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.360
SRR2545915Juvenile tuber94.740
SRP108465SRR5643513five period of Gastrodia elata22.910
SRR5643514five period of Gastrodia elata20.910
SRR5643515five period of Gastrodia elata28.260
SRR5643524five period of Gastrodia elata30.090
SRR5643525five period of Gastrodia elata22.260
SRR5643528five period of Gastrodia elata48.810
SRR5643658five period of Gastrodia elata22.260
SRR5643659five period of Gastrodia elata40.930
SRR5643660five period of Gastrodia elata39.120
SRR5643661five period of Gastrodia elata39.400
SRR5643662five period of Gastrodia elata44.110
SRR5643663five period of Gastrodia elata36.470
SRR5643664five period of Gastrodia elata71.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.430
SRR6049655Rhizomagastrodiae_C368-T10_good_127.130
SRR6049656Rhizomagastrodiae_C368-T07_good_127.310
SRR6049657Rhizomagastrodiae_C368-T07_good_130.200
SRR6049658Rhizomagastrodiae_C368-T04_good_133.700
SRR6049659Rhizomagastrodiae_C368-T04_good_136.610
SRR6049660Rhizomagastrodiae_C368-T01_good_131.060
SRR6049661Rhizomagastrodiae_C368-T04_good_131.130
SRR6049662Rhizomagastrodiae_C368-T01_good_119.070
SRR6049663Rhizomagastrodiae_C368-T01_good_128.490
SRR6049664Rhizomagastrodiae_C368-T10_good_122.890
SRR6049665Rhizomagastrodiae_C368-T10_good_122.890
SRP279888GastroGastrodia elata tuber 33.03
JuvenJuvenile tuber44.36
Mother_GastroMother tuber of Gastrodia elata 58.63
Mother_JuvenMother tuber of Juvenile 53.31