Gene detail

Detail information of GWHGAAEX011377/evm.TU.scaffold_37.132

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|434391665\|ref\|YP_007126612.1\|	3.00E-31	Unspecific monooxygenase [Gloeocapsa sp. PCC 7428]
KOG	KOG0156	3.00E-109	Cytochrome P450 CYP2 subfamily
nr	gi\|302142620\|emb\|CBI19823.3\|	0	unnamed protein product [Vitis vinifera]
Swissprot	tr\|A6YIH8\|C7D55_HYOMU	2.00E-163	Premnaspirodiene oxygenase
trEMBL	tr\|M1ARA4\|M1ARA4_SOLTU	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400028537}
trEMBL	tr\|M1ARA4\|M1ARA4_SOLTU	1.00E-102	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400028537}
TAIR	AT5G25120	3.00E-109	ytochrome p450, family 71, subfamily B, polypeptide 11

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000043	3532711	3604614	+

Transcript Sequence
>GWHTAAEX011377 ATGCTCTCTATGGAATCCTCCTCCGACTTCACACCACCTTTCCCTTTGCTAGTAGTAGTCGCTGGCATCCTTGCAATATTGTTCACAAAAACAAATTGGATCAAAAGAAATAATAGCAGGGCTACGAAGCTGCCTCCCGGGCCAAGGAAACTCCCTATCATTGGAAGCATGCTTCATCTCATAGGCAGAGAGCACCCGCACCACAGGTTAACCAAGCTCGCAAAGACATACGGCCCACTAATGCACATAAAGCTCGGACAAATTGACATCATCATTGTCTCATCTTCTGATTTAGCCTGTGAGGTCTTGAAGACTCATGACATTAACTTTGCTTCGCGGCCCCTTCTGTTGGCCGGCAAGAGCATTTTCTACAATGGTTCAGATGTCGTTTTTTGCCCCTATGGCAAAATTTGGTTACAATTACGCAAAATATGCGCACAACATGTTCTCAGCATAAACCGAGTGAAATACTTTAATTTTATCCGAGAGGTGGAGAATAGTATTCTTGTTAATAAGATTCGCTCGGAGGCTAGATATGGTCCAGTGAACATTACAAAATTATTAGTATCACTGACGAATAGGATTATAGCGAAGGTTGCGTTCGGAAAGGAAACTCGTCATATGAATAGTTTCATTTTGGTAGTGAAAGATGTTTTTAAGTTGAGCTCTGGTTTCAGTATTGCAGAAGCATTCCCATCTCTAGGCTTTTTGGCTAAAATCACTGGTCTGAGAACAGAGATGGAGATTGTGCACAGAACTGTAGATGCAATTTTGAACGAGATAATAGTGGAGCATCAAGCCAAACTTCAATCAATTGGAACCAAACAGTGCTTGGATGAAGATATCGTTGATGTTCTCTTGAAGATTAGCAACTCCAGGGACTTGGATATTTCTCTCACTATGGATAACATCAAAGGTGTTATTTTAGATTTGTTTATCGCTGGAACAGATACAGTATCAAATGTAATGATTTGGGCAATGGCCGAGCTCATTCGACACCCCAAGATTATGCAGAAGGCTCAAAGAGCAGCTAAAAATGCCCTCAAAGGAATGATTAAAATTGATGCTCAAAATTTTAAGGAAATGCCATATCTGAGTTGGGTCATTAAAGAAACGTTGCGACTGCACCCACCGCTTCCTCTGTTATTGCCCAGACTTTCGAGAGAAATTATTAATATTTCAGGGTACTCAGTACCATCTAACAGCCACGTCTTCATCAACGTAGGATCCATAATGAAAGATTCAAGTTACTGGGATGACCCCGAGAATGAGAAAGCCTTAAAAATGCTCTCATTATATATGGAATCCTCCTCCGACTTCACACCACCTTTCCCTTTGTTAGTAGTAGTCGCTGGCATCCTCGCAATATTGTTCACAAAAACAAATTGGATCAAAAGAAATAATGGCAAGGCTAAGAAGCTGCCTCCCGGGCCAAGGAAACTCCCTATCATCGGAAGCATGCTTCATCTCATAGGCAGAGAGCATCCACACCACAGGTTAACCAAGCTCGCAAAGACATACGGCCCACTAATGCACATAAAGCTCGGACAAATTGACATCGTCGTCGTCTCATCTCCTGATTTAGCCTGCGAGGTCTTGAAGACTCATGACATCAACTTAGCTTCACGGCCCCATCTGTTAGCCTGCAAGATCATTTTCTACAATGGTTCAGATGTCGTTTTTTGCCCCTATGGAAAAATTTGGTTACAATTACGCAAAATATGCGCACAACATGTTCTCAGCATAAATCGAGTGAAGTACTTCAATTTTATCAGAGAGGAGGAGAATAGTATTCTTGTTAATAAGATTCACTCGGAGGCTAGATATGGTCCAGTGAACATTACAAAATTATTAGTATCACTGGCGAATAGGACTATAGCGAAGGCTGCGTTCGGAAAGGAAACTCCTCATATGAATAGTTTTATTTTGGTAATAAAAGATGCTATAAAGTTGGGCTCTGGTTTTAGTATTGCAGAAGCATTCCCATCTCTAGGCTTTTTGGCTAAAATCACTGGTCTGAGAACAAAGATGGAAAATGTGCACAGAACTATCGATGCAATTTTGAACGAGATAATAGTGGAACATCAAGCCAAAGTTCAATCAATTGGAACCAAACAATGCTTGGATGAAGATATCGTTGATGTTCTCTTGAAGATTAGCAACTCCGGGGACTTGGATATTTCTCTCACTATTGATAACATCAAAGGTGTTATTTTAGATTTGTTTACCGCTGGAACAGACACAGTATCAAATGCACTGATTTGGGCAATGACCGAGCTCATTCGACACCCCAACGTTATGCAGAAGGCTCAAAGAGCAGCTAAAAATGCCATCGAAGGAATGATTAATAGTGAAGATCAAAAATTTAAGGAAATGCCATATCTGAGTTGGGTCATTAAAGAAACGCTTCGACTGCACCCACCAATTCCTCTGTTATTGCCTAGACTTTCGAGAGAATCTATTAATATTTCAGGGTATTCAGTACCATCTAACAGCCACGTCTTCATCAACGTTGGATCCATAATGAAAGATTCAAGTTACTGGGATGACCCCGAGAAGTTCTTACCTGAGCGATTTAAAGAAAGTGCATTGGATTTTAAAGGGTCAAACTTTGAGTACTTGCCATTTGGATCAGGTAAAAGAATTTGTCCAGGGATCACATTTTCAATGACAAATATTGAATACTCGCTTGCTATACTTTTGTTTCACTTTGATTGGGATATGCCTCATGGAAAGAAAGCAAAGGATTTGGACATGGAGGAAACTTTTGGTGCAAGTATATCAAGAAAGAATGACTTGTATCTACTTGCCACTCCTAATAGCTTGCATGAATTATAA

Network for GWHGAAEX011377

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	45	422	5.00E-70
PF00067.21	p450	475	924	1.50E-94

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B11

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0005506	Molecular Function	iron ion binding
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	Molecular Function	heme binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.740
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	8.000
	SRR5643514	five period of Gastrodia elata	72.540
	SRR5643515	five period of Gastrodia elata	17.850
	SRR5643524	five period of Gastrodia elata	79.740
	SRR5643525	five period of Gastrodia elata	0.030
	SRR5643528	five period of Gastrodia elata	0.080
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	0.020
	SRR5643660	five period of Gastrodia elata	0.070
	SRR5643661	five period of Gastrodia elata	0.120
	SRR5643662	five period of Gastrodia elata	0.000
	SRR5643663	five period of Gastrodia elata	0.020
	SRR5643664	five period of Gastrodia elata	0.090
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	53.070
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	101.120
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	46.750
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	102.010
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	20.010
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	24.130
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	58.320
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	29.140
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	97.380
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	51.600
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	22.250
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	22.250
SRP279888	Gastro	Gastrodia elata tuber	1.03
	Juven	Juvenile tuber	194.58
	Mother_Gastro	Mother tuber of Gastrodia elata	15.20
	Mother_Juven	Mother tuber of Juvenile	14.56