Detail information of GWHGAAEX011386/evm.TU.scaffold_37.145


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|657399197|gb|KEH38683.1|7.48E-43AP2 domain class transcription factor [Medicago truncatula]
Swissprottr|Q40477|ERF4_TOBAC8.00E-39Ethylene-responsive transcription factor 4
trEMBLtr|A0A072VB55|A0A072VB55_MEDTR3.00E-43AP2 domain class transcription factor {ECO:0000313|EMBL:KEH38683.1}
TAIRAT5G442103.00E-37erf domain protein 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004342432054244882+
Transcript Sequence

Network for GWHGAAEX011386

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP221703.30E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.980
SRR2545915Juvenile tuber61.390
SRP108465SRR5643513five period of Gastrodia elata113.810
SRR5643514five period of Gastrodia elata69.720
SRR5643515five period of Gastrodia elata261.540
SRR5643524five period of Gastrodia elata61.620
SRR5643525five period of Gastrodia elata330.770
SRR5643528five period of Gastrodia elata297.120
SRR5643658five period of Gastrodia elata343.750
SRR5643659five period of Gastrodia elata443.630
SRR5643660five period of Gastrodia elata283.530
SRR5643661five period of Gastrodia elata479.390
SRR5643662five period of Gastrodia elata341.240
SRR5643663five period of Gastrodia elata248.280
SRR5643664five period of Gastrodia elata440.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1209.450
SRR6049655Rhizomagastrodiae_C368-T10_good_1219.910
SRR6049656Rhizomagastrodiae_C368-T07_good_1159.080
SRR6049657Rhizomagastrodiae_C368-T07_good_1160.250
SRR6049658Rhizomagastrodiae_C368-T04_good_1211.840
SRR6049659Rhizomagastrodiae_C368-T04_good_1278.020
SRR6049660Rhizomagastrodiae_C368-T01_good_1227.820
SRR6049661Rhizomagastrodiae_C368-T04_good_1185.120
SRR6049662Rhizomagastrodiae_C368-T01_good_1134.670
SRR6049663Rhizomagastrodiae_C368-T01_good_1226.410
SRR6049664Rhizomagastrodiae_C368-T10_good_1179.430
SRR6049665Rhizomagastrodiae_C368-T10_good_1179.430
SRP279888GastroGastrodia elata tuber 140.69
JuvenJuvenile tuber32.41
Mother_GastroMother tuber of Gastrodia elata 544.50
Mother_JuvenMother tuber of Juvenile 140.59