Gene detail

Detail information of GWHGAAEX011401/evm.TU.scaffold_37.167

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0522	5.00E-123	Ankyrin repeat protein
nr	gi\|743793178\|ref\|XP_010923866.1\|	0	PREDICTED: ankyrin repeat domain-containing protein 13C [Elaeis guineensis]
trEMBL	tr\|M0S7T5\|M0S7T5_MUSAM	7.00E-144	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P13940_001}
TAIR	AT1G11740	5.00E-123	ankyrin repeat family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000043	5357320	5364204	+

Transcript Sequence
>GWHTAAEX011401 TTTTAACTTAAAATTATTCTAAGCAAAACTAAAATTTGTGATAAGAAAAAAGTTAGTAGAAAAAGAAAAGCAAAGGGCAAAAGCAAAAGCAAAAGCAAAAGCAAAATCCCGCTTCTTTCCAGCGGTCCGCATTCGCAGCATGCCTCCTCTGTTAGCCCAACTGTTAAGCCTCGGTACAGAGAGATTGATTGCTTCTTCTCCAAAACCCTAAAAATCCATGGAGAATGAAACTCTCCCTCCGGACGCATACTCCCACAGCCCAGCGCACTACTTCATCGCCCTAGGCGACCTTCTCCGACTCCGGCTTCTCCTCTCGTCCCTCCCCGGCCTCTCCCATCCCTCCTCCATTCTTACTTTCTCCGACTCCCTCCTTCAATCCCGCCTAGCCGAAGAAGTTTCCTCCGTCATCGACCGCCGTGACGTTCCCCGTAGAGAGTCCCCCCTCCACCTAGCCGTTCGCCTCCTTCCGCTCTCCTCCGCCATTGCCGCCGTTTCCTCTCTCTCTCTTTCAGGCGCCGATCCTTCCCTCCCCAACTCCTCTGGATGGACGCCTCTCCACCTCTCCCTCTCTCTGCGCCGCCGCCCCCTCGCCCGCATCCTTCTCCGCCATTACCGACTCTCTGCCTGGGCCAAGCTCCGCCGCAGCCTTCCCTCTCTCCTCCCCGCCCTCCGACGCATCCCCGACTTCCGCCTCCACATCTCCCTCCGCCTCGAATCCCCTCTCCTCCCCTTCGTCCCTCGATCTGACGACGTCCGCCTCTCCAAACGCGGCTCCGATCTCCGCGCCGATCGCCGCCGCCACATCTCCTTCCTGTTCCTCGCCGATCCAACCACTCCTGATCTTCTTCCCTTTGGCTCACTTCTTATTCTCGACCGCGATCGCAAGGAGATCCGCGACGCATTCGCTGATGATGACGACGACGAGATTGCGTTGGATGATTCAGCTGCCGCAGCTTATCGCCCCGGGGTTGAGATCGGGAACGCCCGCCTTGTGCCATGCACCAATTGGCTGCGCCGGGAGAGGATGGAGATGGTCGGGGAGTGGAGAACCAGAGTTTACGAGATTCACAATCTGGTGTTCAGTTTCAAGACGCTCTCAGCCGGGGCTGCTGTAGATGAGGATGAGTTTCCTGAGCTGAGGCTTGATGAGGACGCTGAAGAAGGGTTTATCGTGGCGGAGATCGGGAATGCGCCTCCTCGGCATAGCTGCCATGAGGGAGGGAGGGGAGGAGCTGCTGTGGAGGGGAGGAGGAGGAAGAGTGTGGATGCGGCCATGATGATGAATTCGGCTACTGAGAGGATAGGGGAAGGGAGGTTTGTGGCGAGGAAGAGTAAGGAGAAGGAGGTGGTGAAGAATTTGAAGCCGATGGTTTGGCTGACGGAGGACTTTCCATTGAAGACTGAAGAGCTTTTGCCGATGCTGGATATACTTGCCAATAAGATCAAGGTTGTGAAGCAGATCAGGGAGCTTCTCACGACCAAATTCCCGCCTGGAACTTTTCCTGTCAAGGTTGCCATACCAATAATCCCAACTGTGAGGATGGTCATCACATTCACAAAATTCATCAGTCTCCAACCATCGGAACAGTTTTTCACGCCTCTTTCCAGCCCTCACCATCTTTCAGCCCAAGAAGAAGATTATAGAAAGTCAGAGAGGAGTGCCCATAAGTCGTGGCTGAAATGGAGTGGAAGCTCTGCAGCGAATTCTTTCATTTCCCGATCGAAAACCTTGAGCCCACAGGCAAATGAGCATACTGACCTATTCGCAATCCCAAGAGATTATAAATGGGTGGGTATCAGATATAAGGGTTGCAATATAAAAGCATCCAGGTCAAGGAAAGGGAAGCAAAAAGAGATTGGGTGAATGGAATATGAACAAGGAAGGATTCACCGGATAGTTCGTCGGAGAAGATGAACGAACAGAATCGTTTGTTCGAAGGCGCCTTCCTGTCTGCGGCTTCTTTGCTCCACGCATTTTCAAAATGCGACCAAATCGAGCGTAATTTCCTTACTCCCCTTGTATATATAGCAACGCAAAATTGAATTGCAGTATAAAAGTTTTTAACCTGTTCTACTTCATGTTAAACGCTGTTAATCTCAGTTTATTCAAATTTTTTTTATTTTTCACTGCTTTTTATCTCGTGCAAAACAGCCCCTAAATGCAAAAGTAAAAAAATCAGGTAAAAATGCTAAAAAATCTCAAAAAACTTGCCAGCAAATGTTAAAACACTAAAGCAGGCAGTGAAGCTATAAAAGTCCAATGATGTTGTGCAAGAAAACAGAGGAATCAAATGATAGGCATAAAGTTGCCCAAGGAATACCAACTGACAGAGAAGGGGCAAGATAAAAGTGGTAGCTATTTTAGTTCCTTTGAGATTCGTCCAGCAATTGTCAAACAATTTTGGGGAAAAACTGCCCAGCAATTTTAGTTCTTTTAAGATTTGTTGTTATTTTCTTACTTTAAAATAAGAAAATCATTATGTTGTAGCAGTCATGCTCGTGTGTGTGCCATCGATCGCGTGCTATTTTGCCACTCTCAGTGTCTAGAGAGCTGCACATGTAACTTAGTGGTTGTTTGGTTTACAGGGATTTGACTGTTAAATAATAATTTTCTTGGTAAAATGTGGGGTAATCTAAGTACCTCGTTTCTTCACAAAATTCGGATAATCAGGTTATACCTAAATTGGGCGTAATTTGATTACCCTGCCTTTCACAAAAAAAGAAAAAGATCGCAGCAAGACGGATAATTGCCACTTTGTAGTAATCGACGCTGAATATGCAAGCTTCTTCCCTGTTTTGTCGCCGTCCAAGCTTCGACGCTGAAACTGCAATCTTTGTCGCCGCCCAAGCTTCATTCCTACTTCATCCCCGCTATTTCTCTGACACTTCGTCCCTATTTCGTAGTCAACTCCACGATTTCTTTCTGCTCTTTGGTGATCATGACGATGACAATGAAGCTTGCTGCCGCCGACACCGGACACTGATGCAAGACCGATCTGTTGAAGCGACCGACGACTTCGTCCAATCCTTTGCGGCGAGGCCGACTTCACCTGTTTCCGTTGCAATGAATCAACACTGGTTTCGTCCGGCTTTAACCCACGCTCCCTGCAGCGAATCAGCCCAAATACGGTTTTATTTTATTATATTTTAAAAATAAGTTAACCCTAAACCCTAAACATAAAACCCGTTTAAGGCTGTTTGTGTGCAGGATTTTGAGGGTAAAGTAATAATTCTCTTTGGAATTACAAAATACATGTGATCGGTTTGTGTTATCTCAAAGTAATAGGGTTACCGGGTGGGATAATCCTATTACACAGTGTTTCTTCACAAAATACAGGTGATATCAATCGAGCATCCCCACCTTTCTCCAAAAAAAAATTACAGCATATAGCTTTGCCCCACTTCGTTGCTACTTCGTCACCAACGCTGAAACTGCAATCTTCGTCATCAACCAAGATGCATTCATCTTTGTCTCCGCCATTTTCGACTCACCGTCTCTGCTTCGCCACGTTTTCCTCCCAATAAATAAAGCACATCGACGCTGACGTAGGACCATTCCATTGTAGTGATTGATGGCTTCGCTCGATCTGTTGCAGCAGTCGACAGTATCCTCATACGACTTCTACCAACGCTCCATTGCAGCGACATCGACTTCACACGATGTCAAAACTGCAATCCTCTAGCTGGCTAATTAATTCTTCCTCTGGCCGGCCAAAGGCCGACCAGTAGCACCTCCGGCCGGCTTATTGTCGACGATCACTGAGAACAAAACATCAAACTGTAAATTTTGGGAATTTTCTTTGCCGCAGTACAATTACTGTTATTTAAATTACAATGTATTTAGTTTATATGAAAATATTTTATACTGATAATTTTACTCCAATAATTTTCTTACCTCGAACTAATTAGCCCCTACATGACAAAATTTTGCATTTTAATAATTGTACTTCAATAATTTTTTTATCTCG

Network for GWHGAAEX011401

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF11904.7	GPCR_chapero_1	192	523	2.10E-64

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.500
SRP064423	SRR2545915	Juvenile tuber	4.160
SRP108465	SRR5643513	five period of Gastrodia elata	3.460
	SRR5643514	five period of Gastrodia elata	3.220
	SRR5643515	five period of Gastrodia elata	3.680
	SRR5643524	five period of Gastrodia elata	3.330
	SRR5643525	five period of Gastrodia elata	12.430
	SRR5643528	five period of Gastrodia elata	11.980
	SRR5643658	five period of Gastrodia elata	7.920
	SRR5643659	five period of Gastrodia elata	5.980
	SRR5643660	five period of Gastrodia elata	5.410
	SRR5643661	five period of Gastrodia elata	3.790
	SRR5643662	five period of Gastrodia elata	6.620
	SRR5643663	five period of Gastrodia elata	3.520
	SRR5643664	five period of Gastrodia elata	5.020
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	2.560
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.750
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.050
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.620
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.980
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.780
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.070
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.640
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.210
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.400
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.790
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.790
SRP279888	Gastro	Gastrodia elata tuber	2.43
	Juven	Juvenile tuber	4.47
	Mother_Gastro	Mother tuber of Gastrodia elata	4.40
	Mother_Juven	Mother tuber of Juvenile	4.79