Detail information of GWHGAAEX011405/evm.TU.scaffold_37.176


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|255554885|ref|XP_002518480.1|5.03E-19triptychon and cpc, putative [Ricinus communis]
Swissprottr|O22059|CPC_ARATH5.00E-18Transcription factor CPC
trEMBLtr|B9RXL1|B9RXL1_RICCO2.00E-19Triptychon and cpc, putative {ECO:0000313|EMBL:EEF43867.1}
TAIRAT2G464102.00E-17Homeodomain-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004356841175685254-
Transcript Sequence

Network for GWHGAAEX011405

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding801214.70E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.500
SRR2545915Juvenile tuber0.460
SRP108465SRR5643513five period of Gastrodia elata1.640
SRR5643514five period of Gastrodia elata0.450
SRR5643515five period of Gastrodia elata2.080
SRR5643524five period of Gastrodia elata1.220
SRR5643525five period of Gastrodia elata11.490
SRR5643528five period of Gastrodia elata11.500
SRR5643658five period of Gastrodia elata5.250
SRR5643659five period of Gastrodia elata2.180
SRR5643660five period of Gastrodia elata9.560
SRR5643661five period of Gastrodia elata1.210
SRR5643662five period of Gastrodia elata1.210
SRR5643663five period of Gastrodia elata0.810
SRR5643664five period of Gastrodia elata0.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.700
SRR6049655Rhizomagastrodiae_C368-T10_good_10.810
SRR6049656Rhizomagastrodiae_C368-T07_good_12.820
SRR6049657Rhizomagastrodiae_C368-T07_good_11.600
SRR6049658Rhizomagastrodiae_C368-T04_good_12.150
SRR6049659Rhizomagastrodiae_C368-T04_good_13.320
SRR6049660Rhizomagastrodiae_C368-T01_good_16.470
SRR6049661Rhizomagastrodiae_C368-T04_good_14.630
SRR6049662Rhizomagastrodiae_C368-T01_good_13.150
SRR6049663Rhizomagastrodiae_C368-T01_good_18.440
SRR6049664Rhizomagastrodiae_C368-T10_good_12.430
SRR6049665Rhizomagastrodiae_C368-T10_good_12.430
SRP279888GastroGastrodia elata tuber 0.53
JuvenJuvenile tuber24.56
Mother_GastroMother tuber of Gastrodia elata 45.36
Mother_JuvenMother tuber of Juvenile 40.97