Detail information of GWHGAAEX011427/evm.TU.scaffold_3745.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|158339034|ref|YP_001520211.1|1.00E-120glycine dehydrogenase [Acaryochloris marina MBIC11017]
KOGKOG20401.00E-171Glycine dehydrogenase (decarboxylating)
nrgi|527202768|gb|EPS69441.1|4.87E-178glycine dehydrogenase [decarboxylating], mitochondrial, partial [Genlisea aurea]
Swissprottr|O49954|GCSP_SOLTU6.00E-175Glycine dehydrogenase (decarboxylating), mitochondrial (Precursor)
trEMBLtr|S8CWV4|S8CWV4_9LAMI2.00E-178Glycine dehydrogenase [decarboxylating], mitochondrial {ECO:0000313|EMBL:EPS69441.1} (Fragment)
TAIRAT2G260801.00E-171glycine decarboxylase P-protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000037375971+
Transcript Sequence

Network for GWHGAAEX011427

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02347.15GDC-P491554.20E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00281GLDC, gcvP Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Glyoxylate and dicarboxylate metabolismmap00630
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006546Biological Processglycine catabolic process
GO:0003824Molecular Functioncatalytic activity
GO:0004375Molecular Functionglycine dehydrogenase (decarboxylating) activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.00