Detail information of GWHGAAEX011441/evm.TU.scaffold_38.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427737935|ref|YP_007057479.1|3.00E-3050S ribosomal protein L11 methylase [Rivularia sp. PCC 7116]
KOGKOG14990Protein arginine N-methyltransferase PRMT1 and related enzymes
nrgi|743798493|ref|XP_010925253.1|0PREDICTED: protein arginine N-methyltransferase PRMT10 [Elaeis guineensis]
Swissprottr|Q9SNQ2|ANM10_ORYSJ0Protein arginine N-methyltransferase PRMT10
trEMBLtr|M0RLT5|M0RLT5_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P27110_001}
TAIRAT1G048700protein arginine methyltransferase 10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000415629780351-
Transcript Sequence

Network for GWHGAAEX011441

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06325.12PrmA601362.00E-11
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K11434PRMT1 FoxO signaling pathway map04068
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0006479Biological Processprotein methylation
GO:0008168Molecular Functionmethyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms111.430
SRR2545915Juvenile tuber136.870
SRP108465SRR5643513five period of Gastrodia elata90.630
SRR5643514five period of Gastrodia elata63.470
SRR5643515five period of Gastrodia elata68.880
SRR5643524five period of Gastrodia elata64.110
SRR5643525five period of Gastrodia elata29.790
SRR5643528five period of Gastrodia elata16.300
SRR5643658five period of Gastrodia elata25.090
SRR5643659five period of Gastrodia elata140.410
SRR5643660five period of Gastrodia elata129.580
SRR5643661five period of Gastrodia elata124.660
SRR5643662five period of Gastrodia elata148.030
SRR5643663five period of Gastrodia elata142.850
SRR5643664five period of Gastrodia elata164.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1120.250
SRR6049655Rhizomagastrodiae_C368-T10_good_196.670
SRR6049656Rhizomagastrodiae_C368-T07_good_1113.430
SRR6049657Rhizomagastrodiae_C368-T07_good_1150.830
SRR6049658Rhizomagastrodiae_C368-T04_good_1143.460
SRR6049659Rhizomagastrodiae_C368-T04_good_1153.100
SRR6049660Rhizomagastrodiae_C368-T01_good_1151.350
SRR6049661Rhizomagastrodiae_C368-T04_good_1137.460
SRR6049662Rhizomagastrodiae_C368-T01_good_1100.510
SRR6049663Rhizomagastrodiae_C368-T01_good_1124.980
SRR6049664Rhizomagastrodiae_C368-T10_good_1103.970
SRR6049665Rhizomagastrodiae_C368-T10_good_1103.970
SRP279888GastroGastrodia elata tuber 138.80
JuvenJuvenile tuber177.04
Mother_GastroMother tuber of Gastrodia elata 29.09
Mother_JuvenMother tuber of Juvenile 72.77