Detail information of GWHGAAEX011444/evm.TU.scaffold_38.7
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|262194740|ref|YP_003265949.1| | 1.00E-15 | serine/threonine protein kinase [Haliangium ochraceum DSM 14365] |
| KOG | KOG0610 | 4.00E-177 | Putative serine/threonine protein kinase |
| nr | gi|695042604|ref|XP_009408965.1| | 0 | PREDICTED: protein kinase PINOID 2-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q94E49|PID2_ORYSJ | 6.00E-179 | Protein kinase PINOID 2 |
| trEMBL | tr|F6HH71|F6HH71_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB51567.1} |
| TAIR | AT2G26700_2 | 4.00E-177 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000041 | 320483 | 322477 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011444
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 52 | 205 | 1.70E-31 |
| PF00069.24 | Pkinase | 302 | 410 | 2.80E-20 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | AGC_RSK-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.650 |
| SRR2545915 | Juvenile tuber | 1.290 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.880 |
| SRR5643514 | five period of Gastrodia elata | 1.630 | |
| SRR5643515 | five period of Gastrodia elata | 0.430 | |
| SRR5643524 | five period of Gastrodia elata | 0.600 | |
| SRR5643525 | five period of Gastrodia elata | 0.400 | |
| SRR5643528 | five period of Gastrodia elata | 0.520 | |
| SRR5643658 | five period of Gastrodia elata | 0.080 | |
| SRR5643659 | five period of Gastrodia elata | 0.510 | |
| SRR5643660 | five period of Gastrodia elata | 0.180 | |
| SRR5643661 | five period of Gastrodia elata | 0.090 | |
| SRR5643662 | five period of Gastrodia elata | 0.140 | |
| SRR5643663 | five period of Gastrodia elata | 0.110 | |
| SRR5643664 | five period of Gastrodia elata | 0.130 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.580 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.770 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.630 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.270 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.560 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.560 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.190 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.530 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.710 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.340 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.210 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.210 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.50 |
| Juven | Juvenile tuber | 1.22 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2.43 | |
| Mother_Juven | Mother tuber of Juvenile | 1.19 |