Detail information of GWHGAAEX011457/evm.TU.scaffold_38.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|268315734|ref|YP_003289453.1|1.00E-08hypothetical protein Rmar_0157 [Rhodothermus marinus DSM 4252]
nrgi|672128265|ref|XP_008787616.1|0PREDICTED: tetratricopeptide repeat protein 5-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q9M8Y0|SEC_ARATH1.00E-05Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC
trEMBLtr|A0A061E5I6|A0A061E5I6_THECC0Tetratricopeptide repeat-like superfamily protein {ECO:0000313|EMBL:EOX99897.1}
TAIRHS185834745.00E-60Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000041662603763769-
Transcript Sequence

Network for GWHGAAEX011457

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16669.4TTC5_OB3084161.60E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.610
SRR2545915Juvenile tuber19.430
SRP108465SRR5643513five period of Gastrodia elata11.610
SRR5643514five period of Gastrodia elata12.640
SRR5643515five period of Gastrodia elata11.720
SRR5643524five period of Gastrodia elata11.720
SRR5643525five period of Gastrodia elata9.890
SRR5643528five period of Gastrodia elata10.390
SRR5643658five period of Gastrodia elata12.860
SRR5643659five period of Gastrodia elata8.980
SRR5643660five period of Gastrodia elata8.740
SRR5643661five period of Gastrodia elata7.720
SRR5643662five period of Gastrodia elata5.810
SRR5643663five period of Gastrodia elata7.720
SRR5643664five period of Gastrodia elata7.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.650
SRR6049655Rhizomagastrodiae_C368-T10_good_19.780
SRR6049656Rhizomagastrodiae_C368-T07_good_110.720
SRR6049657Rhizomagastrodiae_C368-T07_good_19.680
SRR6049658Rhizomagastrodiae_C368-T04_good_112.920
SRR6049659Rhizomagastrodiae_C368-T04_good_112.960
SRR6049660Rhizomagastrodiae_C368-T01_good_111.150
SRR6049661Rhizomagastrodiae_C368-T04_good_110.510
SRR6049662Rhizomagastrodiae_C368-T01_good_19.620
SRR6049663Rhizomagastrodiae_C368-T01_good_111.560
SRR6049664Rhizomagastrodiae_C368-T10_good_112.020
SRR6049665Rhizomagastrodiae_C368-T10_good_112.020
SRP279888GastroGastrodia elata tuber 9.89
JuvenJuvenile tuber9.63
Mother_GastroMother tuber of Gastrodia elata 9.76
Mother_JuvenMother tuber of Juvenile 9.00