Detail information of GWHGAAEX011463/evm.TU.scaffold_38.28
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0036 | 0 | Predicted mitochondrial carrier protein |
| nr | gi|743875182|ref|XP_010907271.1| | 0 | PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1-like [Elaeis guineensis] |
| Swissprot | tr|O04619|ADNT1_ARATH | 6.00E-66 | Mitochondrial adenine nucleotide transporter ADNT1 |
| trEMBL | tr|M0U658|M0U658_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP03960_001} |
| TAIR | AT5G51050 | 0 | Mitochondrial substrate carrier family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000041 | 917572 | 941890 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011463
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13202.5 | EF-hand_5 | 78 | 98 | 0.0015 |
| PF13499.5 | EF-hand_7 | 106 | 165 | 4.90E-09 |
| PF00153.26 | Mito_carr | 204 | 290 | 3.30E-22 |
| PF00153.26 | Mito_carr | 300 | 388 | 1.40E-22 |
| PF00153.26 | Mito_carr | 399 | 487 | 2.60E-25 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
| GO:0005509 | Molecular Function | calcium ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.440 |
| SRR2545915 | Juvenile tuber | 21.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 19.630 |
| SRR5643514 | five period of Gastrodia elata | 17.730 | |
| SRR5643515 | five period of Gastrodia elata | 17.590 | |
| SRR5643524 | five period of Gastrodia elata | 19.990 | |
| SRR5643525 | five period of Gastrodia elata | 15.910 | |
| SRR5643528 | five period of Gastrodia elata | 24.850 | |
| SRR5643658 | five period of Gastrodia elata | 14.290 | |
| SRR5643659 | five period of Gastrodia elata | 17.300 | |
| SRR5643660 | five period of Gastrodia elata | 16.340 | |
| SRR5643661 | five period of Gastrodia elata | 20.800 | |
| SRR5643662 | five period of Gastrodia elata | 18.060 | |
| SRR5643663 | five period of Gastrodia elata | 17.400 | |
| SRR5643664 | five period of Gastrodia elata | 15.880 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 20.210 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 21.080 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 21.960 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 17.150 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 15.990 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 16.400 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 19.100 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 17.900 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 23.390 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 20.500 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 23.990 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 23.990 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 18.38 |
| Juven | Juvenile tuber | 19.77 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 21.99 | |
| Mother_Juven | Mother tuber of Juvenile | 30.33 |