Detail information of GWHGAAEX011470/evm.TU.scaffold_38.37


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|374317300|ref|YP_005063728.1|4.00E-39prephenate dehydrogenase [Sphaerochaeta pleomorpha str. Grapes]
KOGKOG23807.00E-138Prephenate dehydrogenase (NADP+)
nrgi|743870268|ref|XP_010906000.1|5.89E-162PREDICTED: arogenate dehydrogenase 2, chloroplastic [Elaeis guineensis]
Swissprottr|Q9LMR3|TYRA2_ARATH2.00E-138Arogenate dehydrogenase 2, chloroplastic (Precursor)
trEMBLtr|K3XXU5|K3XXU5_SETIT2.00E-148Uncharacterized protein {ECO:0000313|EnsemblPlants:Si006753m}
TAIRAT1G157107.00E-138prephenate dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004113166281317974-
Transcript Sequence

Network for GWHGAAEX011470

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02153.16PDH592796.60E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15227TYRAAT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of amino acidsmap01230
Tryptophan metabolismmap00380

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006571Biological Processtyrosine biosynthetic process
GO:0004665Molecular Functionprephenate dehydrogenase (NADP+) activity
GO:0008977Molecular Functionprephenate dehydrogenase activity
GO:0009507Cellular Componentchloroplast

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.070
SRR2545915Juvenile tuber14.600
SRP108465SRR5643513five period of Gastrodia elata35.740
SRR5643514five period of Gastrodia elata38.500
SRR5643515five period of Gastrodia elata39.170
SRR5643524five period of Gastrodia elata35.380
SRR5643525five period of Gastrodia elata76.520
SRR5643528five period of Gastrodia elata81.540
SRR5643658five period of Gastrodia elata90.800
SRR5643659five period of Gastrodia elata32.920
SRR5643660five period of Gastrodia elata35.590
SRR5643661five period of Gastrodia elata37.360
SRR5643662five period of Gastrodia elata37.980
SRR5643663five period of Gastrodia elata32.290
SRR5643664five period of Gastrodia elata28.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.350
SRR6049655Rhizomagastrodiae_C368-T10_good_178.500
SRR6049656Rhizomagastrodiae_C368-T07_good_148.370
SRR6049657Rhizomagastrodiae_C368-T07_good_129.780
SRR6049658Rhizomagastrodiae_C368-T04_good_131.720
SRR6049659Rhizomagastrodiae_C368-T04_good_131.710
SRR6049660Rhizomagastrodiae_C368-T01_good_135.050
SRR6049661Rhizomagastrodiae_C368-T04_good_135.170
SRR6049662Rhizomagastrodiae_C368-T01_good_149.980
SRR6049663Rhizomagastrodiae_C368-T01_good_143.360
SRR6049664Rhizomagastrodiae_C368-T10_good_169.340
SRR6049665Rhizomagastrodiae_C368-T10_good_169.340
SRP279888GastroGastrodia elata tuber 25.62
JuvenJuvenile tuber25.07
Mother_GastroMother tuber of Gastrodia elata 34.40
Mother_JuvenMother tuber of Juvenile 23.60