Detail information of GWHGAAEX011472/evm.TU.scaffold_38.40
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|183222788|ref|YP_001840784.1| | 0 | membrane-bound proton-translocating pyrophosphatase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] |
| nr | gi|695028026|ref|XP_009401376.1| | 0 | PREDICTED: pyrophosphate-energized vacuolar membrane proton pump-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|P21616|AVP_VIGRR | 0 | Pyrophosphate-energized vacuolar membrane proton pump |
| trEMBL | tr|M0T123|M0T123_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P23480_001} |
| TAIR | AT1G15690 | 0 | Inorganic H pyrophosphatase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000041 | 1345240 | 1349474 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011472
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03030.15 | H_PPase | 22 | 753 | 1.40E-259 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:1902600 | Biological Process | hydrogen ion transmembrane transport |
| GO:0004427 | Molecular Function | inorganic diphosphatase activity |
| GO:0009678 | Molecular Function | hydrogen-translocating pyrophosphatase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 32.510 |
| SRR2545915 | Juvenile tuber | 32.910 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 150.160 |
| SRR5643514 | five period of Gastrodia elata | 148.730 | |
| SRR5643515 | five period of Gastrodia elata | 118.530 | |
| SRR5643524 | five period of Gastrodia elata | 127.520 | |
| SRR5643525 | five period of Gastrodia elata | 129.090 | |
| SRR5643528 | five period of Gastrodia elata | 112.880 | |
| SRR5643658 | five period of Gastrodia elata | 182.550 | |
| SRR5643659 | five period of Gastrodia elata | 70.020 | |
| SRR5643660 | five period of Gastrodia elata | 75.950 | |
| SRR5643661 | five period of Gastrodia elata | 87.260 | |
| SRR5643662 | five period of Gastrodia elata | 89.870 | |
| SRR5643663 | five period of Gastrodia elata | 76.510 | |
| SRR5643664 | five period of Gastrodia elata | 115.870 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 321.580 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 195.620 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 321.410 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 272.840 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 236.860 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 236.700 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 206.440 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 212.750 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 236.850 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 212.670 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 342.920 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 342.920 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 197.99 |
| Juven | Juvenile tuber | 73.36 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 74.93 | |
| Mother_Juven | Mother tuber of Juvenile | 67.98 |