Gene detail

Detail information of GWHGAAEX011480/evm.TU.scaffold_38.47

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695039644\|ref\|XP_009407366.1\|	0	PREDICTED: uncharacterized protein LOC103990064 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0TCW4\|M0TCW4_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P35210_001}
TAIR	AT2G12400	3.00E-81	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000041	1438856	1455663	-

Transcript Sequence
>GWHTAAEX011480 TCTCTCCCTCTCTCTCTCTCTCTGTAAAACCCACATCATCAATAAAATGGAGAGGCTTTTCTTAGAGCTCTCAGGCGAGCAGCAATGGCTTCTTTCTCTAATCCAGTTGTATTTCTGTTCCTCATTTTCTTTTTCTTCTCAACTCACCCATCTCATGCCGCTTCAGTACTACACCACTGGAGCTCATCAGAATGGCAGGATGGAAATGATGGAAAATTTCCATGGGGCATTATTATTGAAGAGGATTTAGGTCTTCCTTCAACTGGCAGCCTTTCAAAACAAAATAACTCTTTTGTACTAGCTTTGGAGAGAACAAAGAGGAAAGACCCTACAAAACTGTTCAACTACTACATTGGTGGCTGGAATTTAAGTGATGAGCATTACTGGGCTTCAGCTTCTCTTAGTGCTGTTCCAGTTTTTGCTATTGGTTTTGCATGGTTTTTTGGCTTTGGATTGGTTCTGTTTCTCATCTGTTGTTGTTCCTGCTGCTGTGGAAAGAGAAGAAGATTCTCATATTCTCCATATTGCTTTGCACTCTCTCTCTTACTGCTTATCGTGCTTACATGCACAGCAATGATTGGATGCATTGTTTTGAATAATAATCAAGGGAAGTTTCATAATAGCACTAAAAAAATATTGGATTATATTATGAGCCAGTCAAATTCTATTGTAAGGAACCTTGATAATTTTTCAAGAAGCATGGCTGGAGCTAAGAGCATTGGTGTGCATCAGGTTTTCCTTCCTGTTAATCTGCAGACTAAAATTGGTGAAACAGTGAAACTTGCTACCATATCAGCAGATGAGCTTTCTTCAAGAACTTCCATGAATTTTAGCAACATTGATAACTTTCTCAAATATGTGCGAATAGACTTGATCATAGGTTCCACTGTCATGCTTCTTTTGGTATTTCTTGGATTTTTATTTTCCATATTGGGACTGCAATTCCTTGTCTACTGCTCTGTTCTCATTGGATGGATTCTCATTGCCAGCGCATGCATATTATGTGGTGTTCTTATTCTCTTACACAACGTGGTGGGAGACACTTGCATTGCCATGGATGAATGGGTTCTCAAGCCACAAGCAGGCACAGCTCTTGATGATATTTTTCCTTGTATTGATGCTTCAACTTCCAACGCTTCTCTCTTAAGAACAAAAGAAGTCACTTTTGCGCTGGCAAAGGTTGTGAATGAAGTCATACTCAATGTCTCCAATGCTGAATTCCAGTTTCCATCTCTGCCCTCTTCTTCCAACTACAATCAATCTGGACCATTGATTCCGATGCTCTGCAATCCCTATGAACCTGATTTCAGTGAGCGCATGTGTCGGCTCGACGAAGTTAGTTTTGAAGAAGCGCCTCAGGTATGGAGAGGATTCATATGTAACACTACTGCCATCTCTGGTGAAGAGATCTGCTCAACCGTTGGTCGCATCACACCCAACATGTACGGTCAGATGACAGCAGCCGTAAGCTCATGTCAAAGCCTATACCAGTTTAATCCATTCCTCGAAAAAATGACAGATTGTGGCGTTGCAAGAGAGACCTTTAGCCTGATAGGGACTGACAACTGCCCCAAGCTTGATAGTTACAGCAAAGGAATGTATTGTAGCCTCACTGTCTTCACTGCCTCAGTGATGCTCTCCCTCATATTCTGGATGGTTCATGTGGGTGAAAGATGGCGCCATAATTTTTGGAAGCAGTTCATCACGAGGGGCGGCCAATCTGCTCATTTTGAAGAGAGTAAGTTGAGGGAGAGAAATATATAGATCAGTTGAAATATGAAGTTTGATATTGTTGATGGAAGTTTGTTTATAGAATGTAAAGGAACAGTTTTACTTGTTAATGATCTATATGTTGTTGGCATTGAAGACAACAAATCAGGTCTGCAATTTTAAACGGGTCTGTCTTGCCTCTGTTTTTTTTGGTTAATGTAAATGGTCTTATTTTGTTTAAAAAGGAGACGAACGTATAATGAAGCATCCTTTCACGAGTGTTTGAATGATTGGCATTTGAAGTCAAAATTGTCGTTTGATTAAACAATTACTTTATTGCTTCTGATTTCAATATTCAATTACTTAGTTGAGCTTATTTATTTGAATTTAAGATTTTACTACACTATTGCTCAGTGTTTCTTTCGTAATCTTAATATAATTGATATTAAATTTAATATTAAATTGATAATAA

Network for GWHGAAEX011480

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.290
SRP064423	SRR2545915	Juvenile tuber	1.180
SRP108465	SRR5643513	five period of Gastrodia elata	1.390
	SRR5643514	five period of Gastrodia elata	2.850
	SRR5643515	five period of Gastrodia elata	3.230
	SRR5643524	five period of Gastrodia elata	2.910
	SRR5643525	five period of Gastrodia elata	0.310
	SRR5643528	five period of Gastrodia elata	2.160
	SRR5643658	five period of Gastrodia elata	0.410
	SRR5643659	five period of Gastrodia elata	1.430
	SRR5643660	five period of Gastrodia elata	1.340
	SRR5643661	five period of Gastrodia elata	1.690
	SRR5643662	five period of Gastrodia elata	1.460
	SRR5643663	five period of Gastrodia elata	1.120
	SRR5643664	five period of Gastrodia elata	0.970
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.630
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.190
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.350
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.880
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.520
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.010
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.010
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.350
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.180
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.310
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.650
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.650
SRP279888	Gastro	Gastrodia elata tuber	2.24
	Juven	Juvenile tuber	3.60
	Mother_Gastro	Mother tuber of Gastrodia elata	9.60
	Mother_Juven	Mother tuber of Juvenile	7.79