Detail information of GWHGAAEX011523/evm.TU.scaffold_38.97
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG1166 | 1.00E-70 | Mitotic checkpoint serine/threonine protein kinase |
| nr | gi|743767201|ref|XP_010913857.1| | 3.36E-160 | PREDICTED: mitotic spindle checkpoint protein BUBR1 isoform X1 [Elaeis guineensis] |
| Swissprot | tr|O22806|BUBR1_ARATH | 3.00E-125 | Mitotic spindle checkpoint protein BUBR1 |
| trEMBL | tr|W1PUJ6|W1PUJ6_AMBTC | 1.00E-143 | Uncharacterized protein {ECO:0000313|EMBL:ERN11509.1} |
| TAIR | AT2G33560 | 1.00E-70 | BUB1-related (BUB1: budding uninhibited by benzymidazol 1) |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000041 | 2705908 | 2727957 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011523
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF08311.11 | Mad3_BUB1_I | 67 | 188 | 4.20E-41 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K02178 | BUB1 | Cell cycle | map04110 |
| Cell cycle - yeast | map04111 | ||
| Meiosis - yeast | map04113 | ||
| Oocyte meiosis | map04114 | ||
| Progesterone-mediated oocyte maturation | map04914 |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 4.390 |
| SRR2545915 | Juvenile tuber | 6.330 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 5.180 |
| SRR5643514 | five period of Gastrodia elata | 7.800 | |
| SRR5643515 | five period of Gastrodia elata | 7.410 | |
| SRR5643524 | five period of Gastrodia elata | 9.040 | |
| SRR5643525 | five period of Gastrodia elata | 9.250 | |
| SRR5643528 | five period of Gastrodia elata | 27.200 | |
| SRR5643658 | five period of Gastrodia elata | 8.240 | |
| SRR5643659 | five period of Gastrodia elata | 5.320 | |
| SRR5643660 | five period of Gastrodia elata | 3.790 | |
| SRR5643661 | five period of Gastrodia elata | 5.060 | |
| SRR5643662 | five period of Gastrodia elata | 5.000 | |
| SRR5643663 | five period of Gastrodia elata | 3.620 | |
| SRR5643664 | five period of Gastrodia elata | 2.830 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 3.260 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 7.760 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 4.240 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.140 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.060 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 2.240 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 4.710 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.130 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.630 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.100 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 5.740 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 5.740 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.58 |
| Juven | Juvenile tuber | 6.20 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 20.07 | |
| Mother_Juven | Mother tuber of Juvenile | 14.33 |