Detail information of GWHGAAEX011529/evm.TU.scaffold_38.104
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG4229 | 0 | Myosin VII, myosin IXB and related myosins |
| nr | gi|743809950|ref|XP_010928759.1| | 0 | PREDICTED: kinesin-like calmodulin-binding protein homolog [Elaeis guineensis] |
| Swissprot | tr|Q7XPJ0|KCBP_ORYSJ | 0 | Kinesin-like calmodulin-binding protein homolog |
| trEMBL | tr|M0SDT0|M0SDT0_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P11630_001} |
| TAIR | AT5G65930_1 | 0 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000041 | 2836741 | 2892643 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011529
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00784.16 | MyTH4 | 149 | 257 | 8.50E-25 |
| PF09379.9 | FERM_N | 268 | 340 | 6.20E-11 |
| PF00373.17 | FERM_M | 370 | 483 | 1.60E-14 |
| PF00225.22 | Kinesin | 871 | 1185 | 2.00E-100 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0007018 | Biological Process | microtubule-based movement |
| GO:0008017 | Molecular Function | microtubule binding |
| GO:0016491 | Molecular Function | oxidoreductase activity |
| GO:0003777 | Molecular Function | microtubule motor activity |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0005856 | Cellular Component | cytoskeleton |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 29.450 |
| SRR2545915 | Juvenile tuber | 23.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 29.480 |
| SRR5643514 | five period of Gastrodia elata | 22.740 | |
| SRR5643515 | five period of Gastrodia elata | 22.120 | |
| SRR5643524 | five period of Gastrodia elata | 23.420 | |
| SRR5643525 | five period of Gastrodia elata | 25.840 | |
| SRR5643528 | five period of Gastrodia elata | 31.300 | |
| SRR5643658 | five period of Gastrodia elata | 31.780 | |
| SRR5643659 | five period of Gastrodia elata | 20.190 | |
| SRR5643660 | five period of Gastrodia elata | 20.500 | |
| SRR5643661 | five period of Gastrodia elata | 18.570 | |
| SRR5643662 | five period of Gastrodia elata | 20.140 | |
| SRR5643663 | five period of Gastrodia elata | 20.800 | |
| SRR5643664 | five period of Gastrodia elata | 20.380 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.900 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 20.910 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 23.790 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 19.410 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 15.380 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.820 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 18.200 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 14.370 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.660 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 16.140 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 25.970 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 25.970 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 15.22 |
| Juven | Juvenile tuber | 40.85 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 22.49 | |
| Mother_Juven | Mother tuber of Juvenile | 31.03 |