Detail information of GWHGAAEX011539/evm.TU.scaffold_38.117


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13058.00E-131Amino acid transporter protein
nrgi|719982013|ref|XP_010250301.1|5.38E-155PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Nelumbo nucifera]
Swissprottr|O22719|LHTL3_ARATH3.00E-08Lysine histidine transporter-like 3
trEMBLtr|G7IIA0|G7IIA0_MEDTR4.00E-146Transmembrane amino acid transporter family protein {ECO:0000313|EMBL:AES68187.2}
TAIRAT1G805108.00E-131Transmembrane amino acid transporter family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004134268023441916+
Transcript Sequence

Network for GWHGAAEX011539

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.17Aa_trans503211.20E-49
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.520
SRR2545915Juvenile tuber8.140
SRP108465SRR5643513five period of Gastrodia elata12.420
SRR5643514five period of Gastrodia elata13.880
SRR5643515five period of Gastrodia elata14.970
SRR5643524five period of Gastrodia elata15.040
SRR5643525five period of Gastrodia elata17.740
SRR5643528five period of Gastrodia elata13.560
SRR5643658five period of Gastrodia elata20.380
SRR5643659five period of Gastrodia elata11.910
SRR5643660five period of Gastrodia elata14.040
SRR5643661five period of Gastrodia elata14.400
SRR5643662five period of Gastrodia elata12.600
SRR5643663five period of Gastrodia elata13.920
SRR5643664five period of Gastrodia elata15.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.940
SRR6049655Rhizomagastrodiae_C368-T10_good_122.480
SRR6049656Rhizomagastrodiae_C368-T07_good_113.600
SRR6049657Rhizomagastrodiae_C368-T07_good_116.220
SRR6049658Rhizomagastrodiae_C368-T04_good_114.380
SRR6049659Rhizomagastrodiae_C368-T04_good_113.760
SRR6049660Rhizomagastrodiae_C368-T01_good_111.910
SRR6049661Rhizomagastrodiae_C368-T04_good_111.900
SRR6049662Rhizomagastrodiae_C368-T01_good_18.320
SRR6049663Rhizomagastrodiae_C368-T01_good_18.430
SRR6049664Rhizomagastrodiae_C368-T10_good_114.170
SRR6049665Rhizomagastrodiae_C368-T10_good_114.170
SRP279888GastroGastrodia elata tuber 6.68
JuvenJuvenile tuber10.08
Mother_GastroMother tuber of Gastrodia elata 14.06
Mother_JuvenMother tuber of Juvenile 10.38