Detail information of GWHGAAEX011543/evm.TU.scaffold_38.121


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|694997647|ref|XP_009400483.1|0PREDICTED: aberrant root formation protein 4 [Musa acuminata subsp. malaccensis]
Swissprottr|Q84VX3|ALF4_ARATH4.00E-113Aberrant root formation protein 4
trEMBLtr|F6H3V0|F6H3V0_VITVI8.00E-164Putative uncharacterized protein {ECO:0000313|EMBL:CCB46839.1}
TAIRAT5G110301.00E-110aberrant lateral root formation 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004135456233587864+
Transcript Sequence

Network for GWHGAAEX011543

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08568.9Kinetochor_Ybp2851527.70E-07
PF08568.9Kinetochor_Ybp23975813.10E-20
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.460
SRR2545915Juvenile tuber18.840
SRP108465SRR5643513five period of Gastrodia elata14.740
SRR5643514five period of Gastrodia elata13.530
SRR5643515five period of Gastrodia elata15.040
SRR5643524five period of Gastrodia elata15.810
SRR5643525five period of Gastrodia elata14.040
SRR5643528five period of Gastrodia elata12.630
SRR5643658five period of Gastrodia elata14.460
SRR5643659five period of Gastrodia elata18.360
SRR5643660five period of Gastrodia elata21.410
SRR5643661five period of Gastrodia elata17.360
SRR5643662five period of Gastrodia elata15.880
SRR5643663five period of Gastrodia elata19.030
SRR5643664five period of Gastrodia elata14.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.830
SRR6049655Rhizomagastrodiae_C368-T10_good_112.290
SRR6049656Rhizomagastrodiae_C368-T07_good_113.850
SRR6049657Rhizomagastrodiae_C368-T07_good_112.310
SRR6049658Rhizomagastrodiae_C368-T04_good_116.750
SRR6049659Rhizomagastrodiae_C368-T04_good_114.810
SRR6049660Rhizomagastrodiae_C368-T01_good_113.690
SRR6049661Rhizomagastrodiae_C368-T04_good_115.610
SRR6049662Rhizomagastrodiae_C368-T01_good_112.790
SRR6049663Rhizomagastrodiae_C368-T01_good_115.070
SRR6049664Rhizomagastrodiae_C368-T10_good_112.260
SRR6049665Rhizomagastrodiae_C368-T10_good_112.260
SRP279888GastroGastrodia elata tuber 22.90
JuvenJuvenile tuber25.04
Mother_GastroMother tuber of Gastrodia elata 19.52
Mother_JuvenMother tuber of Juvenile 21.75