Detail information of GWHGAAEX011545/evm.TU.scaffold_38.123
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 2.00E-21 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| KOG | KOG1187 | 4.00E-128 | Serine/threonine protein kinase |
| nr | gi|672130784|ref|XP_008788934.1| | 3.22E-173 | PREDICTED: probable receptor-like protein kinase At1g80640 isoform X2 [Phoenix dactylifera] |
| Swissprot | tr|Q0V7T5|Y1864_ARATH | 9.00E-131 | Probable receptor-like protein kinase At1g80640 (Precursor) |
| trEMBL | tr|M0TEV9|M0TEV9_MUSAM | 2.00E-161 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P05190_001} |
| TAIR | AT5G11015 | 4.00E-128 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000041 | 3615024 | 3617561 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011545
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 137 | 341 | 8.10E-40 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-X |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.710 |
| SRR2545915 | Juvenile tuber | 1.590 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.780 |
| SRR5643514 | five period of Gastrodia elata | 7.390 | |
| SRR5643515 | five period of Gastrodia elata | 2.140 | |
| SRR5643524 | five period of Gastrodia elata | 5.950 | |
| SRR5643525 | five period of Gastrodia elata | 0.240 | |
| SRR5643528 | five period of Gastrodia elata | 0.540 | |
| SRR5643658 | five period of Gastrodia elata | 0.190 | |
| SRR5643659 | five period of Gastrodia elata | 1.120 | |
| SRR5643660 | five period of Gastrodia elata | 0.390 | |
| SRR5643661 | five period of Gastrodia elata | 0.800 | |
| SRR5643662 | five period of Gastrodia elata | 0.430 | |
| SRR5643663 | five period of Gastrodia elata | 0.930 | |
| SRR5643664 | five period of Gastrodia elata | 0.480 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 3.220 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 6.690 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 5.110 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.150 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.550 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.780 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.480 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 3.320 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.980 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 5.570 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 9.750 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 9.750 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.36 |
| Juven | Juvenile tuber | 0.97 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.78 | |
| Mother_Juven | Mother tuber of Juvenile | 0.53 |