Detail information of GWHGAAEX011571/evm.TU.scaffold_38.154


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695061442|ref|XP_009419153.1|6.13E-110PREDICTED: uncharacterized protein LOC103999204 isoform X1 [Musa acuminata subsp. malaccensis]
trEMBLtr|W9S6Z6|W9S6Z6_9ROSA9.00E-103Uncharacterized protein {ECO:0000313|EMBL:EXB93287.1}
TAIRAT1G212005.00E-76sequence-specific DNA binding transcription factors

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004144901724491488-
Transcript Sequence

Network for GWHGAAEX011571

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.5Myb_DNA-bind_4641843.10E-20
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.540
SRR2545915Juvenile tuber26.310
SRP108465SRR5643513five period of Gastrodia elata18.930
SRR5643514five period of Gastrodia elata13.300
SRR5643515five period of Gastrodia elata24.090
SRR5643524five period of Gastrodia elata14.940
SRR5643525five period of Gastrodia elata26.650
SRR5643528five period of Gastrodia elata41.790
SRR5643658five period of Gastrodia elata20.820
SRR5643659five period of Gastrodia elata39.680
SRR5643660five period of Gastrodia elata28.940
SRR5643661five period of Gastrodia elata36.240
SRR5643662five period of Gastrodia elata40.970
SRR5643663five period of Gastrodia elata28.210
SRR5643664five period of Gastrodia elata40.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.570
SRR6049655Rhizomagastrodiae_C368-T10_good_111.580
SRR6049656Rhizomagastrodiae_C368-T07_good_115.870
SRR6049657Rhizomagastrodiae_C368-T07_good_114.840
SRR6049658Rhizomagastrodiae_C368-T04_good_116.150
SRR6049659Rhizomagastrodiae_C368-T04_good_119.370
SRR6049660Rhizomagastrodiae_C368-T01_good_120.620
SRR6049661Rhizomagastrodiae_C368-T04_good_116.040
SRR6049662Rhizomagastrodiae_C368-T01_good_114.490
SRR6049663Rhizomagastrodiae_C368-T01_good_118.600
SRR6049664Rhizomagastrodiae_C368-T10_good_119.290
SRR6049665Rhizomagastrodiae_C368-T10_good_119.290
SRP279888GastroGastrodia elata tuber 16.19
JuvenJuvenile tuber23.14
Mother_GastroMother tuber of Gastrodia elata 29.77
Mother_JuvenMother tuber of Juvenile 22.37