Detail information of GWHGAAEX011592/evm.TU.scaffold_38.176


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00123.00E-69DNA damage inducible protein
nrgi|743859012|ref|XP_010942530.1|0PREDICTED: DNA damage-inducible protein 1 isoform X1 [Elaeis guineensis]
trEMBLtr|M0U2J7|M0U2J7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P22380_001}
TAIR72932323.00E-69Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004150687815116055-
Transcript Sequence

Network for GWHGAAEX011592

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00240.22ubiquitin591271.20E-13
PF09668.9Asp_protease2293469.20E-51
PF00627.30UBA4264576.70E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0005515Molecular Functionprotein binding
GO:0004190Molecular Functionaspartic-type endopeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms53.460
SRR2545915Juvenile tuber48.450
SRP108465SRR5643513five period of Gastrodia elata25.930
SRR5643514five period of Gastrodia elata34.200
SRR5643515five period of Gastrodia elata27.160
SRR5643524five period of Gastrodia elata31.400
SRR5643525five period of Gastrodia elata32.680
SRR5643528five period of Gastrodia elata37.500
SRR5643658five period of Gastrodia elata52.270
SRR5643659five period of Gastrodia elata25.250
SRR5643660five period of Gastrodia elata27.850
SRR5643661five period of Gastrodia elata22.900
SRR5643662five period of Gastrodia elata25.060
SRR5643663five period of Gastrodia elata28.000
SRR5643664five period of Gastrodia elata31.050
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.480
SRR6049655Rhizomagastrodiae_C368-T10_good_124.600
SRR6049656Rhizomagastrodiae_C368-T07_good_129.680
SRR6049657Rhizomagastrodiae_C368-T07_good_134.930
SRR6049658Rhizomagastrodiae_C368-T04_good_127.680
SRR6049659Rhizomagastrodiae_C368-T04_good_129.090
SRR6049660Rhizomagastrodiae_C368-T01_good_130.710
SRR6049661Rhizomagastrodiae_C368-T04_good_128.640
SRR6049662Rhizomagastrodiae_C368-T01_good_132.270
SRR6049663Rhizomagastrodiae_C368-T01_good_129.110
SRR6049664Rhizomagastrodiae_C368-T10_good_138.080
SRR6049665Rhizomagastrodiae_C368-T10_good_138.080
SRP279888GastroGastrodia elata tuber 27.17
JuvenJuvenile tuber31.31
Mother_GastroMother tuber of Gastrodia elata 29.25
Mother_JuvenMother tuber of Juvenile 29.17