Gene detail

Detail information of GWHGAAEX011597/CADD00935.1.gene

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|357500653\|ref\|XP_003620615.1\|	1.50E-06	hypothetical protein MTR_6g087780 [Medicago truncatula]
trEMBL	tr\|M0SDG6\|M0SDG6_MUSAM	2.00E-08	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P10490_001}

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000041	5301324	5305523	+

Transcript Sequence
>GWHTAAEX011597 GGGCTATATAATAGCCTGTATCTCCGCCCTAGCATTCTACGCCTCCTACACTTCCTCATTCCTCTTCGTTTGAGAAATTGCCGACGCTGCATCTTCTCCCTCCTCAAATGACTATAAGCTGCTACGATATTGGAACTTCGTTGAACCTACGGAGCCATCCTCTGCCGATCTTTAAGATCTAGTGGATTTCTGTGGGGGCAGGAAGCCCAAGTTCATAGCAAACCCTCCCTAAACCTTTATCCTGAAAAATATTTTTATCTTTCTTGCTGTTTTTTTGGGATTTGATTATGATTTAAACTCTGAAGGTGTTGATCTGATATTATACACTAAGATGTTTGATTTGTTTGTGTTATGATCTTGCGCATCTTTTTGTTCCGTTTTGCTTCTTGCAAGTACTATTAGGTGTGCTTTTGGGCATTTTTTGCCACTTAATTTACAACTCTGTACTGTCTAGGTGTAATAACGAGTGATCATAACAATTTACTTTTTTTATGAACAATTTTTTTTCACTTTCTCTTTTTTTCTTTGTTTTGATTATGATCTAAATTAGAAAGATTTTGATTTTATACTATACTCGAGCGCATAGGTCTGTCGTTATTTGATCTCGGGGCTTCTTTTGTGCTATTTAGCCTTTGCCAATCGTTTCTTGTTACCTTGTCAATAATTATGCACTTTGAGCATCGTGAAGGGCTAATGACGAATGATCGTTAAGATCTAGCGGATTTCTGTGAGGCCGTGTGCCACTGATCGCCTAAATTGTTGTTACACACACTGAAGCCTTTCCATCTGTGTTTATCTTTAGTTTTTACTTAATTTTATGTTATTATTGTAGATCATTCGTGTTAGCAATTTTATAGTTTGCAATGATGATGTTAAGAATTGGTGTGCAGTGGCAATTTTTAATGCCGTGAGCTTTTTCCACCAAAACATACGACTTCTCCTTCCACTGAGCCTAAATTCTTATGATTCTGTCTTGGATATCTTATCTAAATTGATTAACATAGATGATGAACCATAATTCGCAAATCATTTTCTTCTACTCGATTTTTTTTTTTTTCTTTTACATTTTGTTGAAGAATTATAATTTTGTAAGATTCTTAAATAGTTTACTATGATGTATTCTTTAATTAAATATTAATCCTTATTTTATTTGAATTATTTAAATTTAGGCTGATTAATCTCTATAAAAGACACCTACTGATTACCTTAAAATAAAATATGCGTTCGTATATTAGGTATTCTGTTGGTGTGGTGTTAAGTCGACTGCAAACCAATATGGCAGTAACTTGTTCAATAAGAAGGATTTGCAAAAATATTGAATATGATTACTTTACATCCTTCAACAGAAGTCTGATCTATAGGACTTTGGGAGTTCTTGCATTGAATTTGTAAAGGTTGTTGTCCATGAATACTCTGACCAGATTTTATGAAAACCAACACAATAAATATTTGAGAAAAATCTGGAATTGTTTAGATGCTTAGAAAAGGCTCTTTAAATAGCGTATTGTTCGTTGGGTTCTTAAATGATGAAGGAAGCTATTCCCAAGCAAAAATACATCTGAGATTACATCACTTGTGATGTTCTATATAGTTTTCAATCTGATTGTATCATTTATTCACTTCTGTATGGTAAGTGGCGAAATTTATCTATTATTCTAGCTTTCGTTTTGTTTTTTGCAAGCATTAGAGTAGTTTAGGTTGACTACTGAATGTTTAAAATGTAACTAAATTTTATGCGCATATATTATCATAAATCTAAAAATAGAAATGAATTATGTAGTTGAAATTTACTGTGTTATATTGTAGTGTTTGTTCTTAAGAAGGTAAATTTTATGTTTATCTTTGTTTTATTATAAATCTTAAATGTCATATACATAAAAATATGTCAATTTGTTTAGTATTATGGGTGCTGATGGTGAATTATCAAAATGTTGTAGTGGATGTTTAAGAGGCCCATAGGTTACGCAAAATAGTTGGTTACACACGCTGAATGCATGATTCTCTAATATTTTTTAATTTTTTGCTTATTATATGTTAACCACCTCTACAGAACATTGGTTAAAACATTTGTCATTGATCCGAAAATAGTTTATAACTTGAATGGTTTGGATAAATAATGAGTACAAAAACTTCAATCTGCTTCACTTAGTTTTTGTATTTTGTATCACTTAGTTAAATGTTCTTTTTGATTTAAAACTTGTGAAGATAAACAAATGCTTGTTTCTCAAAACATTTGCAGTGGCTGCCATAGTGCTTTCGCCTGGTCAGGCTTTGAGAGCATGTGCTGTTCATCATTTTCTTCCTTGGATGTCTGGGGTTATAAAAATTATTTGCGTTCTCTTCCACACGCATATATATATATATATATATATATTTATGTGTTGCTAGATTTACACATTGGTACACAACAAAATATATAGATGATGTGTTAATCTAACATGCAAGTATGTTTTCTATTGGTGTTGGATATATTTTTTGGTTTAAGCACTACATTTTTCATATATATATATATATGTATATATATATATGTATATACATATGTATGTATGTATGAAATCAAAATATATGTATGTATGAACTCAAAATTAAGTACATTAAAACTAATGTTCGTCAACCCACAGGTCTAGGTGTGCACAAATCTCTCTGCATCATTTTTGTTATTTAAAGAAATGATTTTTAATTTGAAATTGTACTATTCTTTTGGTAATGGATGCTTTGTATTGGTGTTGTTGCACAAGTAAATCTAATGATATACATGGCACGGTAAAGTTAATTATATTTGTTTGATTAGTATGTAGTGTTACGCCATTATAAAACTATAGTTTGATGATAGAGTAATCACGTAGCATAACACCGTCTATTAATTCTTATTGCTTTCCTGCATTATTTAGTGCAGTGGTTGTAACGTGATTAATCTATCATCAAACTATAATGGCACACCTAAATAGCAGATTTTAAAATCTCTACTCAAGGTTCAACGTCTCTACTCAAGATTTTAAAATCTGCTTCATCTCTATAATTCATTTTTTTTTAATTGTTTTTATGTTCAATGATTTAAGCTAAAGGTGCTTTTGAATTAAAACTTGTGAGGACAATCAAAAGGCTTGTTTCTCAAAACATTCGCAGTGGCCACCTGAGAGCTTTCGCCTTGCCAGGCTTGAGAGCTTCTGCTGCTCCAATTCCTTCCTTGGATGTCTGAGCTTGTTGTTTGCTGATTAACGAATCGTTTCACGATGGTAGACTTTGCATTAAACAAAATGAAGACTGTCTCTCGATAGCGTTTCGAATCCTCTGATCAAAGATGAAGTGCTCCTGGATAGTAGATTCTATAAAGCTGTCCTCCGCTTAATATATTTATTGCAGGAGTGGTCCTAGATTGCTTCAACCTTAATTGTATTTTTTATTTTTTTGATTTATAAACTAATATTGTTTCTTTAAATACAAATGCAGTTAAAATACATTTACCTCTTTTTTATTGTAGCCTAAAATACTATTGGTTGAATGCAATATCGATTTAGGGGCTTTTTTGGTTTACTATTACCTGTTGAAGGTCTAAATTATTGAAAGAACTTGTTTATGGAATGAATGGAATACTTTTGCAGCTACTGTGGCTGAGCCAGTGACGCCAATCATAGTTCGTCAGTTTTATTGTTATGGAGCTAAATTGAGTCGGCTAATGCTCTATCAACTACTCATGTATCTCCTAGAAACTTTCGTTGTGCTTCTCAAATTGCTGTGGATCTGGTAAATTGTTGAATCCTAAGCATGTGACACTTTTGGGATTTTGACACTTTACATTAAGTGCAAACATGCGAAACTTTTGAGATTTGACTGTGTTGTATGTAATTGTATAAGCATTTGTATGTCATATGTTGTAATTATGAATTTGGTGCCATATGACCCTAAATAAGTCTTAATATTTATGATGCATGCAGCGTCGAACACATATCCA

Network for GWHGAAEX011597

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX011597
GLYNSLYLRPSILRLLHFLIPLRLRNCRRCIFSLLKLAATILELRTYGAILCRSLRSSGFLWGQEAQVHSKPSLNLYPEKYFYLSCCFFGILFKLRCSDIIHDVFVCVMILRIFLFRFASCKYYVCFWAFFATFTTLYCLGVITSDHNNLLFLTIFFHFLFFSLFLSKLERFFYTILERIGLSLFDLGASFVLFSLCQSFLVTLSIIMHFEHREGLMTNDRDLADFCEAVCHSPKLLLHTLKPFHLCLSLVFTFYVIIVDHSCQFYSLQCELVCSGNFCRELFPPKHTTSPSTEPKFLFCLGYLIIDHRTIIRKSFSSTRFFFFSFTFCRIIILDSIVYYDVFFNILILILFELFKFRLINLYKRHLLITLKNMRSYIRYSVGVVLSRLQTNMAVTCSIRRICKNIEYDYFTSFNRSLIYRTLGVLALNLRLLSMNTLTRFYENQHNKYLRKIWNCLDAKRLFKRIVRWVLKRKLFPSKNTSEITSLVMFYIVFNLIVSFIHFCMVSGEIYLLFLSFCFLQALEFRLTTECLKCNILCAYIIINLKIEMNYVVEIYCVILCLFLRRILCLSLFYYKSMSYTKYVNLFSIMGADGELSKCCSGCLRGPVTQNSWLHTLNAFSNIFFFAYYMLTTSTEHWLKHLSLIRKFITMVWINNEYKNFNLLHLVFVFCITLNVLFDLKLVKINKCLFLKTFAVAAIVLSPGQALRACAVHHFLPWMSGVIKIICVLFHTHIYIYIYIFMCCIYTLVHNKIYRCVNLTCKYVFYWCWIYFLVALHFSYIYIYVYIYMYIHMYVCMKSKYMYVTQNVHNCSSTHRSRCAQISLHHFCYLKKFLINCTILLVMDALYWCCCTSKSNDIHGTVKLIIFVLVCSVTPLNYSLMIESRSITPSINSYCFPALFSAVVVTLIYHQTIMAHLNSRFNLYSRFNVSTQDFKICFISIIHFFLIVFMFNDLSRCFIKTCEDNQKACFSKHSQWPPESFRLARLESFCCSNSFLGCLSLLFADRIVSRWTLHTKRLSLDSVSNPLIKDEVLLDSRFYKAVLRLIYLLQEWSIASTLIVFFIFLIYKLILFLIQMQLKYIYLFFIVANTIGMQYRFRGFFGLLLPVEGLNYKNLFMEMEYFCSYCGASDANHSSSVLLLWSIESANALSTTHVSPRNFRCASQIAVDLVNCILSMHFWDFDTLHVQTCETFEILCCMLYKHLYVICCNYEFGAIPISLNIYDACSVEHIS

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	39.140
SRP064423	SRR2545915	Juvenile tuber	36.280
SRP108465	SRR5643513	five period of Gastrodia elata	31.200
	SRR5643514	five period of Gastrodia elata	51.720
	SRR5643515	five period of Gastrodia elata	26.180
	SRR5643524	five period of Gastrodia elata	49.770
	SRR5643525	five period of Gastrodia elata	33.490
	SRR5643528	five period of Gastrodia elata	31.340
	SRR5643658	five period of Gastrodia elata	34.880
	SRR5643659	five period of Gastrodia elata	31.260
	SRR5643660	five period of Gastrodia elata	35.930
	SRR5643661	five period of Gastrodia elata	29.200
	SRR5643662	five period of Gastrodia elata	31.720
	SRR5643663	five period of Gastrodia elata	40.750
	SRR5643664	five period of Gastrodia elata	21.170
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	30.210
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	26.950
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	29.930
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	30.110
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.440
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.560
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	13.670
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.780
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.830
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	43.440
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	43.440
SRP279888	Gastro	Gastrodia elata tuber	14.60
	Juven	Juvenile tuber	40.45
	Mother_Gastro	Mother tuber of Gastrodia elata	16.45
	Mother_Juven	Mother tuber of Juvenile	30.33