Detail information of GWHGAAEX011598/evm.TU.scaffold_38.181


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672141756|ref|XP_008794716.1|6.07E-103PREDICTED: myb family transcription factor APL-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q9SAK5|APL_ARATH1.00E-56Myb family transcription factor APL
trEMBLtr|M0S0F2|M0S0F2_MUSAM7.00E-98Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P16440_001}
TAIRAT3G241201.00E-68Homeodomain-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004153110015325004+
Transcript Sequence

Network for GWHGAAEX011598

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding32832.20E-08
PF14379.5Myb_CC_LHEQLE1171622.50E-21
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGARP-G2-like

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.710
SRR2545915Juvenile tuber30.890
SRP108465SRR5643513five period of Gastrodia elata27.350
SRR5643514five period of Gastrodia elata32.860
SRR5643515five period of Gastrodia elata24.820
SRR5643524five period of Gastrodia elata29.840
SRR5643525five period of Gastrodia elata20.860
SRR5643528five period of Gastrodia elata17.120
SRR5643658five period of Gastrodia elata20.880
SRR5643659five period of Gastrodia elata23.100
SRR5643660five period of Gastrodia elata22.590
SRR5643661five period of Gastrodia elata23.620
SRR5643662five period of Gastrodia elata20.290
SRR5643663five period of Gastrodia elata22.270
SRR5643664five period of Gastrodia elata23.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.340
SRR6049655Rhizomagastrodiae_C368-T10_good_125.560
SRR6049656Rhizomagastrodiae_C368-T07_good_124.990
SRR6049657Rhizomagastrodiae_C368-T07_good_118.450
SRR6049658Rhizomagastrodiae_C368-T04_good_117.320
SRR6049659Rhizomagastrodiae_C368-T04_good_115.300
SRR6049660Rhizomagastrodiae_C368-T01_good_123.520
SRR6049661Rhizomagastrodiae_C368-T04_good_120.320
SRR6049662Rhizomagastrodiae_C368-T01_good_126.550
SRR6049663Rhizomagastrodiae_C368-T01_good_125.130
SRR6049664Rhizomagastrodiae_C368-T10_good_130.130
SRR6049665Rhizomagastrodiae_C368-T10_good_130.130
SRP279888GastroGastrodia elata tuber 25.65
JuvenJuvenile tuber24.26
Mother_GastroMother tuber of Gastrodia elata 20.27
Mother_JuvenMother tuber of Juvenile 15.91