Detail information of GWHGAAEX011603/evm.TU.scaffold_38.186


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672173795|ref|XP_008807036.1|1.10E-150PREDICTED: tetraspanin-7-like [Phoenix dactylifera]
Swissprottr|Q8S8Q6|TET8_ARATH3.00E-117Tetraspanin-8
trEMBLtr|B3TLS7|B3TLS7_ELAGV1.00E-146Senescence-associated protein {ECO:0000313|EMBL:ACF06508.1}
TAIRAT2G238101.00E-116tetraspanin8

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004154402415443786-
Transcript Sequence

Network for GWHGAAEX011603

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00335.19Tetraspannin72533.30E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms135.730
SRR2545915Juvenile tuber132.190
SRP108465SRR5643513five period of Gastrodia elata186.570
SRR5643514five period of Gastrodia elata208.910
SRR5643515five period of Gastrodia elata292.390
SRR5643524five period of Gastrodia elata225.300
SRR5643525five period of Gastrodia elata387.870
SRR5643528five period of Gastrodia elata404.460
SRR5643658five period of Gastrodia elata404.840
SRR5643659five period of Gastrodia elata237.520
SRR5643660five period of Gastrodia elata236.840
SRR5643661five period of Gastrodia elata303.760
SRR5643662five period of Gastrodia elata341.470
SRR5643663five period of Gastrodia elata240.620
SRR5643664five period of Gastrodia elata741.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1289.890
SRR6049655Rhizomagastrodiae_C368-T10_good_1227.600
SRR6049656Rhizomagastrodiae_C368-T07_good_1224.100
SRR6049657Rhizomagastrodiae_C368-T07_good_1262.620
SRR6049658Rhizomagastrodiae_C368-T04_good_1202.060
SRR6049659Rhizomagastrodiae_C368-T04_good_1226.510
SRR6049660Rhizomagastrodiae_C368-T01_good_1218.110
SRR6049661Rhizomagastrodiae_C368-T04_good_1196.640
SRR6049662Rhizomagastrodiae_C368-T01_good_1155.930
SRR6049663Rhizomagastrodiae_C368-T01_good_1213.880
SRR6049664Rhizomagastrodiae_C368-T10_good_1319.560
SRR6049665Rhizomagastrodiae_C368-T10_good_1319.560
SRP279888GastroGastrodia elata tuber 190.71
JuvenJuvenile tuber109.53
Mother_GastroMother tuber of Gastrodia elata 522.92
Mother_JuvenMother tuber of Juvenile 352.81