Gene detail

Database	Orthologs	E value	Annotation
COG	gi\|392382827\|ref\|YP_005032024.1\|	5.00E-08	cytochrome c oxidase, subunit II [Azospirillum brasilense Sp245]
KOG	KOG4767	1.00E-12	Cytochrome c oxidase, subunit II, and related proteins
nr	gi\|57639669\|gb\|AAW55681.1\|	1.08E-13	cytochrome oxidase subunit II [Eichhornia crassipes]
Swissprot	tr\|P04373\|COX2_ORYSJ	2.00E-14	Cytochrome c oxidase subunit 2
trEMBL	tr\|Q5IA94\|Q5IA94_EICCR	4.00E-14	Cytochrome oxidase subunit II {ECO:0000313\|EMBL:AAW55681.1} (Fragment)
TAIR	ATMI014	1.00E-12	Unannotated protein

Scaffold	Start	End	Strand
GWHAAEX00000041	5447967	5450520	-

Transcript Sequence
>GWHTAAEX011605 ATGCTTTTCGCTTTTAGTGGGGAACTGGTCGTCCCTTCTGCGTGTCGAAGTCTTGAAGGGGCCAGTTGGGCTGTACCTTCCTCAGGTGTCAAATGTGATGCTGTACCTGGTCGTTCAAATCAGACCTCCATTTCGGTCCTTAGAGAAGGAGTTTACTATGGCGCTACTGAACTCAATAGGGACCCCCCCCCCCTCACAAAGGCGATCACTTCCGTCTGTGACGGTTTTTCCAATACAACCAAAAGCAAAAAAGGTCCCGCCAGTTACGCCAAAAGATGCGTACAACCAGAAGTGCTTCTGTCGCCCAACTTAATTCGCGGGGCCGTCAGATAG

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K02261	COX2	Metabolic pathways	map01100
		Oxidative phosphorylation	map00190
		Cardiac muscle contraction	map04260
		Thermogenesis	map04714

GO term	Ontology	Name
GO:0005507	Molecular Function	copper ion binding
GO:0004129	Molecular Function	cytochrome-c oxidase activity
GO:0016020	Cellular Component	membrane

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.510
SRP108465	SRR5643513	five period of Gastrodia elata	0.000
	SRR5643514	five period of Gastrodia elata	0.000
	SRR5643515	five period of Gastrodia elata	0.000
	SRR5643524	five period of Gastrodia elata	0.000
	SRR5643525	five period of Gastrodia elata	0.000
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	0.000
	SRR5643660	five period of Gastrodia elata	0.000
	SRR5643661	five period of Gastrodia elata	0.000
	SRR5643662	five period of Gastrodia elata	0.000
	SRR5643663	five period of Gastrodia elata	0.000
	SRR5643664	five period of Gastrodia elata	0.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.000
SRP279888	Gastro	Gastrodia elata tuber	0.00
	Juven	Juvenile tuber	0.00
	Mother_Gastro	Mother tuber of Gastrodia elata	0.00
	Mother_Juven	Mother tuber of Juvenile	0.00