Detail information of GWHGAAEX011616/evm.TU.scaffold_38.199


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428768632|ref|YP_007160422.1|1.00E-19hypothetical protein Cyan10605_0224 [Cyanobacterium aponinum PCC 10605]
nrgi|720030574|ref|XP_010265558.1|2.53E-93PREDICTED: uncharacterized protein LOC104603261 [Nelumbo nucifera]
trEMBLtr|M0U8S2|M0U8S2_MUSAM2.00E-87Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP13130_001}
TAIRAT2G240204.00E-71Uncharacterised BCR, YbaB family COG0718

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004157004045717810+
Transcript Sequence

Network for GWHGAAEX011616

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02575.15YbaB_DNA_bd941822.30E-15
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms34.290
SRR2545915Juvenile tuber38.910
SRP108465SRR5643513five period of Gastrodia elata37.960
SRR5643514five period of Gastrodia elata36.640
SRR5643515five period of Gastrodia elata29.070
SRR5643524five period of Gastrodia elata33.240
SRR5643525five period of Gastrodia elata36.670
SRR5643528five period of Gastrodia elata30.620
SRR5643658five period of Gastrodia elata34.990
SRR5643659five period of Gastrodia elata36.030
SRR5643660five period of Gastrodia elata39.030
SRR5643661five period of Gastrodia elata38.830
SRR5643662five period of Gastrodia elata46.630
SRR5643663five period of Gastrodia elata40.800
SRR5643664five period of Gastrodia elata45.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.400
SRR6049655Rhizomagastrodiae_C368-T10_good_124.890
SRR6049656Rhizomagastrodiae_C368-T07_good_130.990
SRR6049657Rhizomagastrodiae_C368-T07_good_138.540
SRR6049658Rhizomagastrodiae_C368-T04_good_134.260
SRR6049659Rhizomagastrodiae_C368-T04_good_135.850
SRR6049660Rhizomagastrodiae_C368-T01_good_128.990
SRR6049661Rhizomagastrodiae_C368-T04_good_130.840
SRR6049662Rhizomagastrodiae_C368-T01_good_126.930
SRR6049663Rhizomagastrodiae_C368-T01_good_131.840
SRR6049664Rhizomagastrodiae_C368-T10_good_133.770
SRR6049665Rhizomagastrodiae_C368-T10_good_133.770
SRP279888GastroGastrodia elata tuber 52.76
JuvenJuvenile tuber35.46
Mother_GastroMother tuber of Gastrodia elata 19.23
Mother_JuvenMother tuber of Juvenile 16.37