Detail information of GWHGAAEX011619/evm.TU.scaffold_38.203
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|521464512|ref|YP_008151634.1| | 3.00E-27 | hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2] |
| KOG | KOG1187 | 0 | Serine/threonine protein kinase |
| nr | gi|743767094|ref|XP_010913798.1| | 0 | PREDICTED: serine/threonine-protein kinase At5g01020-like [Elaeis guineensis] |
| Swissprot | tr|Q8GXZ3|Y5102_ARATH | 1.00E-156 | Serine/threonine-protein kinase At5g01020 |
| trEMBL | tr|I1Q4D3|I1Q4D3_ORYGL | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA06G0199600.1} |
| TAIR | AT2G07180 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000041 | 5808803 | 5835845 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011619
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 80 | 352 | 4.30E-49 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.480 |
| SRR2545915 | Juvenile tuber | 21.490 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 42.870 |
| SRR5643514 | five period of Gastrodia elata | 37.450 | |
| SRR5643515 | five period of Gastrodia elata | 53.690 | |
| SRR5643524 | five period of Gastrodia elata | 45.390 | |
| SRR5643525 | five period of Gastrodia elata | 42.950 | |
| SRR5643528 | five period of Gastrodia elata | 75.690 | |
| SRR5643658 | five period of Gastrodia elata | 41.580 | |
| SRR5643659 | five period of Gastrodia elata | 33.270 | |
| SRR5643660 | five period of Gastrodia elata | 29.070 | |
| SRR5643661 | five period of Gastrodia elata | 36.100 | |
| SRR5643662 | five period of Gastrodia elata | 37.580 | |
| SRR5643663 | five period of Gastrodia elata | 36.400 | |
| SRR5643664 | five period of Gastrodia elata | 31.230 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 25.770 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 18.470 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 25.340 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 23.380 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 23.630 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 22.840 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 26.010 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 24.870 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 29.500 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 27.820 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 27.760 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 27.760 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 30.67 |
| Juven | Juvenile tuber | 30.35 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 102.54 | |
| Mother_Juven | Mother tuber of Juvenile | 106.06 |