Detail information of GWHGAAEX011644/evm.TU.scaffold_39.23
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|695020514|ref|XP_009397307.1| | 1.52E-34 | PREDICTED: allene oxide synthase 1, chloroplastic-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q7Y0C8|C74A1_ORYSJ | 2.00E-31 | Allene oxide synthase 1, chloroplastic (Precursor) |
| trEMBL | tr|I1PFU9|I1PFU9_ORYGL | 2.00E-29 | Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA03G0324500.1} |
| TAIR | AT5G42650 | 5.00E-14 | allene oxide synthase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000035 | 1372270 | 1373282 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011644
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01723 | AOS | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| alpha-Linolenic acid metabolism | map00592 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.000 |
| SRR2545915 | Juvenile tuber | 0.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.040 |
| SRR5643514 | five period of Gastrodia elata | 6.500 | |
| SRR5643515 | five period of Gastrodia elata | 7.010 | |
| SRR5643524 | five period of Gastrodia elata | 6.310 | |
| SRR5643525 | five period of Gastrodia elata | 16.320 | |
| SRR5643528 | five period of Gastrodia elata | 6.920 | |
| SRR5643658 | five period of Gastrodia elata | 12.200 | |
| SRR5643659 | five period of Gastrodia elata | 11.330 | |
| SRR5643660 | five period of Gastrodia elata | 15.890 | |
| SRR5643661 | five period of Gastrodia elata | 16.920 | |
| SRR5643662 | five period of Gastrodia elata | 15.960 | |
| SRR5643663 | five period of Gastrodia elata | 14.340 | |
| SRR5643664 | five period of Gastrodia elata | 11.230 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 3.150 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 19.860 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.430 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.960 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.940 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.400 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.430 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.430 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 13.79 |
| Juven | Juvenile tuber | 17.72 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 13.32 | |
| Mother_Juven | Mother tuber of Juvenile | 24.89 |