Detail information of GWHGAAEX011648/evm.TU.scaffold_39.31


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|114328873|ref|YP_746030.1|2.00E-14acyl carrier protein [Granulibacter bethesdensis CGDNIH1]
KOGKOG17482.00E-36Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit
nrgi|672166314|ref|XP_008803083.1|6.77E-55PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X2 [Phoenix dactylifera]
Swissprottr|P93092|ACP1_CASGL1.00E-48Acyl carrier protein 1, chloroplastic (Precursor)
trEMBLtr|G8FGI5|G8FGI5_ELAGV6.00E-54Acyl carrier protein {ECO:0000256|RuleBase:RU000722} (Fragment)
TAIRAT4G250502.00E-36acyl carrier protein 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003520594472067365-
Transcript Sequence

Network for GWHGAAEX011648

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00550.24PP-binding661331.90E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006633Biological Processfatty acid biosynthetic process
GO:0031177Molecular Functionphosphopantetheine binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms77.850
SRR2545915Juvenile tuber141.320
SRP108465SRR5643513five period of Gastrodia elata184.550
SRR5643514five period of Gastrodia elata229.250
SRR5643515five period of Gastrodia elata213.940
SRR5643524five period of Gastrodia elata221.790
SRR5643525five period of Gastrodia elata192.500
SRR5643528five period of Gastrodia elata193.240
SRR5643658five period of Gastrodia elata184.320
SRR5643659five period of Gastrodia elata159.860
SRR5643660five period of Gastrodia elata151.050
SRR5643661five period of Gastrodia elata162.880
SRR5643662five period of Gastrodia elata184.790
SRR5643663five period of Gastrodia elata186.140
SRR5643664five period of Gastrodia elata149.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1163.490
SRR6049655Rhizomagastrodiae_C368-T10_good_1198.500
SRR6049656Rhizomagastrodiae_C368-T07_good_1210.130
SRR6049657Rhizomagastrodiae_C368-T07_good_1143.340
SRR6049658Rhizomagastrodiae_C368-T04_good_1159.810
SRR6049659Rhizomagastrodiae_C368-T04_good_1125.970
SRR6049660Rhizomagastrodiae_C368-T01_good_1139.730
SRR6049661Rhizomagastrodiae_C368-T04_good_1175.330
SRR6049662Rhizomagastrodiae_C368-T01_good_1240.350
SRR6049663Rhizomagastrodiae_C368-T01_good_1192.750
SRR6049664Rhizomagastrodiae_C368-T10_good_1242.510
SRR6049665Rhizomagastrodiae_C368-T10_good_1242.510
SRP279888GastroGastrodia elata tuber 239.05
JuvenJuvenile tuber126.15
Mother_GastroMother tuber of Gastrodia elata 138.53
Mother_JuvenMother tuber of Juvenile 106.06