Detail information of GWHGAAEX011649/evm.TU.scaffold_39.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|159897428|ref|YP_001543675.1|1.00E-22serine/threonine protein kinase [Herpetosiphon aurantiacus DSM 785]
KOGKOG11870Serine/threonine protein kinase
nrgi|672194197|ref|XP_008776230.1|0PREDICTED: serine/threonine-protein kinase PBS1-like [Phoenix dactylifera]
Swissprottr|Q9FE20|PBS1_ARATH0Serine/threonine-protein kinase PBS1
trEMBLtr|A0A061EVX3|A0A061EVX3_THECC0Serine/threonine-protein kinase PBS1 {ECO:0000313|EMBL:EOY06429.1}
TAIRAT5G186100Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003521094962146690-
Transcript Sequence

Network for GWHGAAEX011649

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase822913.80E-44
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIIa-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.710
SRR2545915Juvenile tuber20.180
SRP108465SRR5643513five period of Gastrodia elata17.940
SRR5643514five period of Gastrodia elata19.660
SRR5643515five period of Gastrodia elata24.640
SRR5643524five period of Gastrodia elata19.540
SRR5643525five period of Gastrodia elata26.040
SRR5643528five period of Gastrodia elata31.430
SRR5643658five period of Gastrodia elata26.660
SRR5643659five period of Gastrodia elata22.030
SRR5643660five period of Gastrodia elata19.270
SRR5643661five period of Gastrodia elata19.650
SRR5643662five period of Gastrodia elata19.350
SRR5643663five period of Gastrodia elata20.080
SRR5643664five period of Gastrodia elata17.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.740
SRR6049655Rhizomagastrodiae_C368-T10_good_122.720
SRR6049656Rhizomagastrodiae_C368-T07_good_119.340
SRR6049657Rhizomagastrodiae_C368-T07_good_115.540
SRR6049658Rhizomagastrodiae_C368-T04_good_117.020
SRR6049659Rhizomagastrodiae_C368-T04_good_117.940
SRR6049660Rhizomagastrodiae_C368-T01_good_119.750
SRR6049661Rhizomagastrodiae_C368-T04_good_119.170
SRR6049662Rhizomagastrodiae_C368-T01_good_122.440
SRR6049663Rhizomagastrodiae_C368-T01_good_123.630
SRR6049664Rhizomagastrodiae_C368-T10_good_122.220
SRR6049665Rhizomagastrodiae_C368-T10_good_122.220
SRP279888GastroGastrodia elata tuber 20.14
JuvenJuvenile tuber17.57
Mother_GastroMother tuber of Gastrodia elata 33.79
Mother_JuvenMother tuber of Juvenile 25.41