Detail information of GWHGAAEX011661/evm.TU.scaffold_39.49


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21541.00E-83Predicted nucleolar protein involved in ribosome biogenesis
nrgi|695070143|ref|XP_009382086.1|0PREDICTED: nucleolar complex protein 4 homolog [Musa acuminata subsp. malaccensis]
trEMBLtr|J3M0S6|J3M0S6_ORYBR0Uncharacterized protein {ECO:0000313|EnsemblPlants:OB04G30010.1}
TAIRAT2G172501.00E-83CCAAT-binding factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003528847452927746-
Transcript Sequence

Network for GWHGAAEX011661

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03914.16CBF3234757.00E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.760
SRR2545915Juvenile tuber40.870
SRP108465SRR5643513five period of Gastrodia elata14.740
SRR5643514five period of Gastrodia elata21.760
SRR5643515five period of Gastrodia elata16.680
SRR5643524five period of Gastrodia elata17.490
SRR5643525five period of Gastrodia elata12.700
SRR5643528five period of Gastrodia elata10.220
SRR5643658five period of Gastrodia elata14.490
SRR5643659five period of Gastrodia elata20.190
SRR5643660five period of Gastrodia elata19.300
SRR5643661five period of Gastrodia elata18.590
SRR5643662five period of Gastrodia elata16.480
SRR5643663five period of Gastrodia elata17.990
SRR5643664five period of Gastrodia elata16.330
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.750
SRR6049655Rhizomagastrodiae_C368-T10_good_120.750
SRR6049656Rhizomagastrodiae_C368-T07_good_121.180
SRR6049657Rhizomagastrodiae_C368-T07_good_117.750
SRR6049658Rhizomagastrodiae_C368-T04_good_115.280
SRR6049659Rhizomagastrodiae_C368-T04_good_115.750
SRR6049660Rhizomagastrodiae_C368-T01_good_118.910
SRR6049661Rhizomagastrodiae_C368-T04_good_115.260
SRR6049662Rhizomagastrodiae_C368-T01_good_124.310
SRR6049663Rhizomagastrodiae_C368-T01_good_119.320
SRR6049664Rhizomagastrodiae_C368-T10_good_120.940
SRR6049665Rhizomagastrodiae_C368-T10_good_120.940
SRP279888GastroGastrodia elata tuber 19.97
JuvenJuvenile tuber19.71
Mother_GastroMother tuber of Gastrodia elata 5.93
Mother_JuvenMother tuber of Juvenile 7.84