Detail information of GWHGAAEX011665/evm.TU.scaffold_39.59


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|408402717|ref|YP_006860700.1|3.00E-135archaeal thermosome [Candidatus Nitrososphaera gargensis Ga9.2]
KOGKOG03570Chaperonin complex component, TCP-1 epsilon subunit (CCT5)
nrgi|743845269|ref|XP_010938539.1|0PREDICTED: T-complex protein 1 subunit epsilon [Elaeis guineensis]
Swissprottr|O04450|TCPE_ARATH0T-complex protein 1 subunit epsilon {ECO:0000303|PubMed:11599560}
trEMBLtr|A0A068V081|A0A068V081_COFCA0Coffea canephora
TAIRAT1G245100TCP-1/cpn60 chaperonin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003539352823955741-
Transcript Sequence

Network for GWHGAAEX011665

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00118.23Cpn60_TCP1405324.10E-156
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006457Biological Processprotein folding
GO:0051082Molecular Functionunfolded protein binding
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms191.260
SRR2545915Juvenile tuber152.800
SRP108465SRR5643513five period of Gastrodia elata109.150
SRR5643514five period of Gastrodia elata113.360
SRR5643515five period of Gastrodia elata100.260
SRR5643524five period of Gastrodia elata103.020
SRR5643525five period of Gastrodia elata57.720
SRR5643528five period of Gastrodia elata69.160
SRR5643658five period of Gastrodia elata54.940
SRR5643659five period of Gastrodia elata109.870
SRR5643660five period of Gastrodia elata119.250
SRR5643661five period of Gastrodia elata106.460
SRR5643662five period of Gastrodia elata107.650
SRR5643663five period of Gastrodia elata112.010
SRR5643664five period of Gastrodia elata107.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1142.780
SRR6049655Rhizomagastrodiae_C368-T10_good_1106.860
SRR6049656Rhizomagastrodiae_C368-T07_good_1136.520
SRR6049657Rhizomagastrodiae_C368-T07_good_1153.450
SRR6049658Rhizomagastrodiae_C368-T04_good_1142.470
SRR6049659Rhizomagastrodiae_C368-T04_good_1149.310
SRR6049660Rhizomagastrodiae_C368-T01_good_1162.260
SRR6049661Rhizomagastrodiae_C368-T04_good_1146.790
SRR6049662Rhizomagastrodiae_C368-T01_good_1144.660
SRR6049663Rhizomagastrodiae_C368-T01_good_1148.320
SRR6049664Rhizomagastrodiae_C368-T10_good_1137.430
SRR6049665Rhizomagastrodiae_C368-T10_good_1137.430
SRP279888GastroGastrodia elata tuber 135.60
JuvenJuvenile tuber199.66
Mother_GastroMother tuber of Gastrodia elata 64.23
Mother_JuvenMother tuber of Juvenile 105.08