Detail information of GWHGAAEX011676/evm.TU.scaffold_39.76


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31752.00E-40Protein phosphatase 4 regulatory subunit 2 related protein
nrgi|743774615|ref|XP_010917667.1|1.50E-81PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-B isoform X1 [Elaeis guineensis]
trEMBLtr|M0TP56|M0TP56_MUSAM4.00E-67Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P10030_001}
TAIRAT5G170702.00E-40Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003550785035104749-
Transcript Sequence

Network for GWHGAAEX011676

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09184.10PPP4R2482462.10E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0019888Molecular Functionprotein phosphatase regulator activity
GO:0030289Cellular Componentprotein phosphatase 4 complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.500
SRR2545915Juvenile tuber45.020
SRP108465SRR5643513five period of Gastrodia elata40.850
SRR5643514five period of Gastrodia elata30.020
SRR5643515five period of Gastrodia elata39.540
SRR5643524five period of Gastrodia elata30.310
SRR5643525five period of Gastrodia elata40.720
SRR5643528five period of Gastrodia elata42.550
SRR5643658five period of Gastrodia elata41.940
SRR5643659five period of Gastrodia elata48.140
SRR5643660five period of Gastrodia elata55.940
SRR5643661five period of Gastrodia elata45.850
SRR5643662five period of Gastrodia elata51.050
SRR5643663five period of Gastrodia elata60.460
SRR5643664five period of Gastrodia elata50.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.500
SRR6049655Rhizomagastrodiae_C368-T10_good_126.870
SRR6049656Rhizomagastrodiae_C368-T07_good_123.160
SRR6049657Rhizomagastrodiae_C368-T07_good_135.060
SRR6049658Rhizomagastrodiae_C368-T04_good_127.770
SRR6049659Rhizomagastrodiae_C368-T04_good_128.970
SRR6049660Rhizomagastrodiae_C368-T01_good_124.960
SRR6049661Rhizomagastrodiae_C368-T04_good_125.720
SRR6049662Rhizomagastrodiae_C368-T01_good_119.840
SRR6049663Rhizomagastrodiae_C368-T01_good_118.640
SRR6049664Rhizomagastrodiae_C368-T10_good_120.810
SRR6049665Rhizomagastrodiae_C368-T10_good_120.810
SRP279888GastroGastrodia elata tuber 62.37
JuvenJuvenile tuber92.08
Mother_GastroMother tuber of Gastrodia elata 35.11
Mother_JuvenMother tuber of Juvenile 85.86