Detail information of GWHGAAEX011694/evm.TU.scaffold_392.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743875027|ref|XP_010907232.1|4.72E-92PREDICTED: 60S ribosomal protein L5, mitochondrial [Elaeis guineensis]
Swissprottr|P42793|RM05_ARATH6.00E-7360S ribosomal protein L5, mitochondrial
trEMBLtr|G9HNS0|G9HNS0_PHODC3.00E-92Ribosomal protein L5 {ECO:0000313|EMBL:AEM43900.1}
TAIRATMI0185.00E-81Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000003888056781109-
Transcript Sequence

Network for GWHGAAEX011694

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.770
SRR2545915Juvenile tuber1.300
SRP108465SRR5643513five period of Gastrodia elata0.870
SRR5643514five period of Gastrodia elata2.150
SRR5643515five period of Gastrodia elata3.450
SRR5643524five period of Gastrodia elata3.370
SRR5643525five period of Gastrodia elata0.710
SRR5643528five period of Gastrodia elata1.780
SRR5643658five period of Gastrodia elata1.010
SRR5643659five period of Gastrodia elata5.290
SRR5643660five period of Gastrodia elata9.330
SRR5643661five period of Gastrodia elata0.390
SRR5643662five period of Gastrodia elata1.380
SRR5643663five period of Gastrodia elata2.230
SRR5643664five period of Gastrodia elata1.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.880
SRR6049655Rhizomagastrodiae_C368-T10_good_13.040
SRR6049656Rhizomagastrodiae_C368-T07_good_11.480
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_11.240
SRR6049659Rhizomagastrodiae_C368-T04_good_11.220
SRR6049660Rhizomagastrodiae_C368-T01_good_10.730
SRR6049661Rhizomagastrodiae_C368-T04_good_14.030
SRR6049662Rhizomagastrodiae_C368-T01_good_12.360
SRR6049663Rhizomagastrodiae_C368-T01_good_13.480
SRR6049664Rhizomagastrodiae_C368-T10_good_12.550
SRR6049665Rhizomagastrodiae_C368-T10_good_12.550
SRP279888GastroGastrodia elata tuber 4.24
JuvenJuvenile tuber4.73
Mother_GastroMother tuber of Gastrodia elata 2.16
Mother_JuvenMother tuber of Juvenile 11.02