Gene detail

Detail information of GWHGAAEX011701/evm.TU.scaffold_398.3

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743756989\|ref\|XP_010919685.1\|	3.22E-13	PREDICTED: uncharacterized protein At4g18490 [Elaeis guineensis]

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000398	17203	36066	-

Transcript Sequence
>GWHTAAEX011701 GTTCATGGCTTGTGCAGTTCTTATGTTTATATATTTTTACTTTTGAAATTTCTTAATATAATATGAAGTTCATATTTTTTTAATATTTCAGATCAGCAGACTGATCTTACTCATAAAACAGAGGTTTCTATAGCCAAAGGAGTTGCTGTTCCAGAAGATAATGAGAAGAAAACTTGTGTTACTTTGGCACAGAGAGAACATTCTCATGGGAATTACTTGGCTAAGGAAAATTCTGATAACAACCAAAATTTCTGCCTTCAGTCATTTTCTGGTGATGGCTCAGCAGAAGTAGGTCCTTCAGAAATCCAGAGAGATATTGCTTTTTCGGATGCTGCTAAATTAAGAACAACAAAGGAAAAACTTGTTTTGATGCAGCCGATCAGCACTTCACCCTCAAGTAGTTCAAGCCCTGTGGATTCCTATAATTTAGGATGTTGGACAAAAGCAAGCAAGAAAGAATTAACAAATCATGGCAACGAGCTTCAAAAACATCAGAACCAAGACCCATTATCCCGATTAGCTGGAAGTGTCACTAGTTCAGTACAAATAAGAAAAGACATTTATAACTCCGTTGGCCAAAAAAAATCTATGGAGGGAGTTAAAAATATTGATGAGAAGCAGAATTTATGCCAAAACCTAACGCTACCACCTGAAAAACAGAATTCACACCAAAATCTTATGCTGCCATCATTGAAGAGCGATAAACCTTTTGGGGGACTAGCAAAGCTGCGTGGGTTAATGAGCATTGGCCTACAGTTAAAAACCTTCAATAAGTTGGAAGATACTAATCCCCAGCAGTCGCCTGCATTTCTATCAAAACCAATTAATTCCACATTGGTGGCCAGAACAAAGAGTGCTCATGCAACAACCACTAATGAAACCAGCTTACAATTAAAATCTTCAAGTGAGTCCTCCCAGAAATTTGCTATGGATATCAAAAGCTTGGCAGAGCGCAGCCTTCAGAAACCCATTACCTATGCTACTGTTAACCACAAAGTGCCATCTGCTGGTAACAACACTGTTTCTGTGAAAGAGAATGCTACAACAAATATCATTTCGGGCACCAGACTTTGTTCCCCTATTTCAACAATTAATAAAGCTATTCTTGACTCTGCTGTTACAAAAAAAACAGAAGTGAAGAAGAATAAGCCAAATTCTGCAAAACCAACTGAAGCAAAATCTGTGCTTTTTATGGAGAAAAGGATGGAATGCCCTTTGAACGCTGCTTCCAAAACTGCCAATCCGGTCAGCATTGAGAGGAAAACCTATTTGCATTCATCTTTAAAGCGGAAGACAGACGAGCAATCCATTGCAGATCTGGAGACATACAAAACCTTGAAAAGCGTGCACGTGCCCAATGCCAGCCGAAGGATTCCATTTGAATCTTCTCCAAACACCACAGGCAAATTGGTAGGCATCAAGAAAAAGATGCTTGTATATATTTATTCATCAATTCTGGCTTTCCAATCATACTGGTTGATGAAATTCATTTTGTTTCTTCCTCTCTTATTCTTTTTTGGGTCCCTGAGATCCAAGCTACAGAAGCTTGCAAGGATGCCGTCCCAGTTATCACAGCTGTACCTGAGCTGGGAGATCCAGCGGCTGAATTTTCACCTCTTATCACAGATGATGAAAATCTGCAAATATCTGAAAACCTTACAAAGGAGCTTGATAAGATATGCAACATTCTGAGAAAGGAACACGAAGACGCCAAGGAGCATCAGGTCCGCTCAATAATAAACAACAATGCGCTGCTCTTGCTCAACTTTCATATGCTTGAGGAAAAGATATCCTTTTATCAGAGTATAGTAGACCGGTACCCTTACCGTTGCTATTTTCACCCGCATATAAATATTGTGCTCCTTAACATGTAATACATTCAGGCATTTCACAAATTTACCGCCAGCCTGCTGCATGCGGAAACATGAAGAAGAGTGTGCAGCCTTTTTCCGCATCAGCAAGCTTCCTTCATCTATCTACTGGCCGGTAATCAGAGAGTTCTTTAAACCGTAACATCGCCACCACTGATATAACAAAGAAAACTAGTTTAAAGAAGTCTCTGATTTTACTAGTAATTTTCCCCAGACCATGCTTTCTTGTTTTTTAGCCCATTAAGCAATATGTACTGGATGTCTCTGTTTGATATGATACATATAATGTGCCTATGTGCAAGTGGGAAGTAGATTAGAGAGAGAATTTTGTCAAGGTGCAGAGGGAGGAGAAAAATTAAGTGAACTTTTGTGAGCACCACATGCAAACAAAAAGAATTAGACGGGAGTCATGTAGAGTGAGAGATGGCTTTATTAGTATTTTGCATGCAAGGCATTGTATCTGCATGATGGGAACAAATTGCACCCAATAATGCAGATAAAATATAACACCCCAATGGATGAATGAAACAGGAACATCGGATAAAATATAATCTTATATTAAATCTTCATAAAATAAAAATTGAGGAATTAATGAGGAGCGCCACACCATTCTAATCTCTTATACTGAGTTTCTAGGAATGTTTTAACTACCTTGCTCTGATACCACTTATTGGGATCGAATAGGGTTTAAACTAAGAGCGAAACAAAAAGAAACTTGAGCGAGCGTTGAGAAAC

Network for GWHGAAEX011701

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.350
SRP064423	SRR2545915	Juvenile tuber	0.550
SRP108465	SRR5643513	five period of Gastrodia elata	0.970
	SRR5643514	five period of Gastrodia elata	0.810
	SRR5643515	five period of Gastrodia elata	1.100
	SRR5643524	five period of Gastrodia elata	0.950
	SRR5643525	five period of Gastrodia elata	1.650
	SRR5643528	five period of Gastrodia elata	1.180
	SRR5643658	five period of Gastrodia elata	1.400
	SRR5643659	five period of Gastrodia elata	0.480
	SRR5643660	five period of Gastrodia elata	0.710
	SRR5643661	five period of Gastrodia elata	0.720
	SRR5643662	five period of Gastrodia elata	1.020
	SRR5643663	five period of Gastrodia elata	0.860
	SRR5643664	five period of Gastrodia elata	0.630
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.620
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.570
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.450
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.620
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.390
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.510
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.420
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.470
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.350
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.440
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.600
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.600
SRP279888	Gastro	Gastrodia elata tuber	1.90
	Juven	Juvenile tuber	0.67
	Mother_Gastro	Mother tuber of Gastrodia elata	2.94
	Mother_Juven	Mother tuber of Juvenile	2.15