Detail information of GWHGAAEX011712/evm.TU.scaffold_4.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|336117058|ref|YP_004571825.1|8.00E-26serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
KOGKOG11871.00E-141Serine/threonine protein kinase
nrgi|695029604|ref|XP_009402232.1|1.41E-150PREDICTED: serine/threonine-protein kinase At3g07070-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SFT7|Y3707_ARATH3.00E-141Serine/threonine-protein kinase At3g07070
trEMBLtr|M0T2Q6|M0T2Q6_MUSAM4.00E-149Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P29320_001}
TAIRAT5G186101.00E-141Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000011260632281492-
Transcript Sequence

Network for GWHGAAEX011712

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase742803.70E-45
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIIa-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.990
SRR2545915Juvenile tuber0.670
SRP108465SRR5643513five period of Gastrodia elata0.740
SRR5643514five period of Gastrodia elata1.110
SRR5643515five period of Gastrodia elata1.180
SRR5643524five period of Gastrodia elata1.300
SRR5643525five period of Gastrodia elata1.260
SRR5643528five period of Gastrodia elata2.340
SRR5643658five period of Gastrodia elata0.880
SRR5643659five period of Gastrodia elata0.690
SRR5643660five period of Gastrodia elata0.560
SRR5643661five period of Gastrodia elata0.380
SRR5643662five period of Gastrodia elata0.470
SRR5643663five period of Gastrodia elata0.070
SRR5643664five period of Gastrodia elata0.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.380
SRR6049655Rhizomagastrodiae_C368-T10_good_10.330
SRR6049656Rhizomagastrodiae_C368-T07_good_10.550
SRR6049657Rhizomagastrodiae_C368-T07_good_10.290
SRR6049658Rhizomagastrodiae_C368-T04_good_10.180
SRR6049659Rhizomagastrodiae_C368-T04_good_10.430
SRR6049660Rhizomagastrodiae_C368-T01_good_10.560
SRR6049661Rhizomagastrodiae_C368-T04_good_10.490
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.070
SRR6049664Rhizomagastrodiae_C368-T10_good_10.060
SRR6049665Rhizomagastrodiae_C368-T10_good_10.060
SRP279888GastroGastrodia elata tuber 0.75
JuvenJuvenile tuber0.55
Mother_GastroMother tuber of Gastrodia elata 3.99
Mother_JuvenMother tuber of Juvenile 9.38