Detail information of GWHGAAEX011724/evm.TU.scaffold_4.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|46579644|ref|YP_010452.1|7.00E-07protein-P-II uridylyltransferase [Desulfovibrio vulgaris str. Hildenborough]
nrgi|743780888|ref|XP_010920651.1|0PREDICTED: uncharacterized protein LOC105044447 [Elaeis guineensis]
Swissprottr|O80644|ACR9_ARATH2.00E-168ACT domain-containing protein ACR9 {ECO:0000305}
trEMBLtr|M0T777|M0T777_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P15290_001}
TAIRAT2G395708.00E-168ACT domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000011446843451988+
Transcript Sequence

Network for GWHGAAEX011724

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.080
SRR2545915Juvenile tuber20.630
SRP108465SRR5643513five period of Gastrodia elata24.550
SRR5643514five period of Gastrodia elata31.470
SRR5643515five period of Gastrodia elata24.690
SRR5643524five period of Gastrodia elata21.420
SRR5643525five period of Gastrodia elata24.050
SRR5643528five period of Gastrodia elata18.260
SRR5643658five period of Gastrodia elata31.340
SRR5643659five period of Gastrodia elata65.760
SRR5643660five period of Gastrodia elata81.840
SRR5643661five period of Gastrodia elata56.350
SRR5643662five period of Gastrodia elata40.560
SRR5643663five period of Gastrodia elata40.330
SRR5643664five period of Gastrodia elata39.160
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.910
SRR6049655Rhizomagastrodiae_C368-T10_good_120.570
SRR6049656Rhizomagastrodiae_C368-T07_good_128.110
SRR6049657Rhizomagastrodiae_C368-T07_good_127.170
SRR6049658Rhizomagastrodiae_C368-T04_good_131.610
SRR6049659Rhizomagastrodiae_C368-T04_good_131.090
SRR6049660Rhizomagastrodiae_C368-T01_good_131.510
SRR6049661Rhizomagastrodiae_C368-T04_good_129.930
SRR6049662Rhizomagastrodiae_C368-T01_good_124.510
SRR6049663Rhizomagastrodiae_C368-T01_good_121.250
SRR6049664Rhizomagastrodiae_C368-T10_good_130.300
SRR6049665Rhizomagastrodiae_C368-T10_good_130.300
SRP279888GastroGastrodia elata tuber 57.85
JuvenJuvenile tuber55.71
Mother_GastroMother tuber of Gastrodia elata 31.34
Mother_JuvenMother tuber of Juvenile 28.66