Detail information of GWHGAAEX011725/evm.TU.scaffold_4.26


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07041.00E-162ADP-ribosylation factor GTPase activator
nrgi|743841962|ref|XP_010937673.1|0PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD7-like [Elaeis guineensis]
Swissprottr|O80925|AGD7_ARATH3.00E-163ADP-ribosylation factor GTPase-activating protein AGD7
trEMBLtr|M0THR0|M0THR0_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P15230_001}
TAIRAT2G375501.00E-162ARF-GAP domain 7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000011453652460344-
Transcript Sequence

Network for GWHGAAEX011725

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01412.17ArfGap8933.10E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12492ARFGAP1 Endocytosis map04144

Gene Ontology

GO term OntologyName
GO:0005096Molecular FunctionGTPase activator activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms191.350
SRR2545915Juvenile tuber241.580
SRP108465SRR5643513five period of Gastrodia elata149.450
SRR5643514five period of Gastrodia elata122.240
SRR5643515five period of Gastrodia elata115.060
SRR5643524five period of Gastrodia elata116.220
SRR5643525five period of Gastrodia elata162.300
SRR5643528five period of Gastrodia elata125.750
SRR5643658five period of Gastrodia elata216.040
SRR5643659five period of Gastrodia elata174.830
SRR5643660five period of Gastrodia elata191.230
SRR5643661five period of Gastrodia elata180.410
SRR5643662five period of Gastrodia elata192.730
SRR5643663five period of Gastrodia elata200.410
SRR5643664five period of Gastrodia elata232.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1171.190
SRR6049655Rhizomagastrodiae_C368-T10_good_1106.300
SRR6049656Rhizomagastrodiae_C368-T07_good_1154.420
SRR6049657Rhizomagastrodiae_C368-T07_good_1208.870
SRR6049658Rhizomagastrodiae_C368-T04_good_1162.840
SRR6049659Rhizomagastrodiae_C368-T04_good_1193.490
SRR6049660Rhizomagastrodiae_C368-T01_good_1166.660
SRR6049661Rhizomagastrodiae_C368-T04_good_1165.530
SRR6049662Rhizomagastrodiae_C368-T01_good_1111.810
SRR6049663Rhizomagastrodiae_C368-T01_good_1121.920
SRR6049664Rhizomagastrodiae_C368-T10_good_1116.860
SRR6049665Rhizomagastrodiae_C368-T10_good_1116.860
SRP279888GastroGastrodia elata tuber 270.33
JuvenJuvenile tuber268.18
Mother_GastroMother tuber of Gastrodia elata 136.80
Mother_JuvenMother tuber of Juvenile 171.38