Detail information of GWHGAAEX011728/evm.TU.scaffold_4.29


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428313433|ref|YP_007124410.1|3.00E-36glutamate N-acetyltransferase/amino-acid acetyltransferase [Microcoleus sp. PCC 7113]
KOGKOG27864.00E-46Putative glutamate/ornithine acetyltransferase
nrgi|672175393|ref|XP_008807747.1|8.84E-74PREDICTED: arginine biosynthesis bifunctional protein ArgJ, chloroplastic [Phoenix dactylifera]
Swissprottr|B9SZB6|ARGJ_RICCO4.00E-71Arginine biosynthesis bifunctional protein ArgJ beta chain {ECO:0000255|HAMAP-Rule:MF_03124} (Precursor)
trEMBLtr|M0RHY2|M0RHY2_MUSAM9.00E-71Arginine biosynthesis bifunctional protein ArgJ, chloroplastic {ECO:0000256|HAMAP-Rule:MF_03124}
TAIRAT2G375004.00E-46arginine biosynthesis protein ArgJ family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000011468406474047+
Transcript Sequence

Network for GWHGAAEX011728

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01960.17ArgJ721855.90E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00620argJ Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Arginine biosynthesismap00220

Gene Ontology

GO term OntologyName
GO:0006526Biological Processarginine biosynthetic process
GO:0004358Molecular Functionglutamate N-acetyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.540
SRR2545915Juvenile tuber6.020
SRP108465SRR5643513five period of Gastrodia elata6.530
SRR5643514five period of Gastrodia elata7.000
SRR5643515five period of Gastrodia elata5.960
SRR5643524five period of Gastrodia elata6.520
SRR5643525five period of Gastrodia elata2.490
SRR5643528five period of Gastrodia elata2.720
SRR5643658five period of Gastrodia elata2.760
SRR5643659five period of Gastrodia elata5.440
SRR5643660five period of Gastrodia elata6.170
SRR5643661five period of Gastrodia elata5.180
SRR5643662five period of Gastrodia elata7.550
SRR5643663five period of Gastrodia elata7.430
SRR5643664five period of Gastrodia elata6.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.510
SRR6049655Rhizomagastrodiae_C368-T10_good_14.990
SRR6049656Rhizomagastrodiae_C368-T07_good_16.220
SRR6049657Rhizomagastrodiae_C368-T07_good_15.810
SRR6049658Rhizomagastrodiae_C368-T04_good_14.670
SRR6049659Rhizomagastrodiae_C368-T04_good_13.360
SRR6049660Rhizomagastrodiae_C368-T01_good_14.670
SRR6049661Rhizomagastrodiae_C368-T04_good_15.620
SRR6049662Rhizomagastrodiae_C368-T01_good_17.280
SRR6049663Rhizomagastrodiae_C368-T01_good_14.600
SRR6049664Rhizomagastrodiae_C368-T10_good_17.900
SRR6049665Rhizomagastrodiae_C368-T10_good_17.900
SRP279888GastroGastrodia elata tuber 5.82
JuvenJuvenile tuber10.19
Mother_GastroMother tuber of Gastrodia elata 2.55
Mother_JuvenMother tuber of Juvenile 4.31