Detail information of GWHGAAEX011731/evm.TU.scaffold_4.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00482.00E-62Transcription factor, Myb superfamily
nrgi|695065522|ref|XP_009421350.1|1.26E-67PREDICTED: myb-related protein MYBAS1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q53NK6|MYBA1_ORYSJ9.00E-65Myb-related protein MYBAS1
trEMBLtr|M0RHX8|M0RHX8_MUSAM5.00E-68Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P13520_001}
TAIRAT5G597802.00E-62myb domain protein 59

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000011542513543938+
Transcript Sequence

Network for GWHGAAEX011731

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding3502.50E-14
PF00249.30Myb_DNA-binding571001.90E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.420
SRR2545915Juvenile tuber10.450
SRP108465SRR5643513five period of Gastrodia elata29.510
SRR5643514five period of Gastrodia elata16.420
SRR5643515five period of Gastrodia elata6.400
SRR5643524five period of Gastrodia elata13.710
SRR5643525five period of Gastrodia elata3.220
SRR5643528five period of Gastrodia elata1.970
SRR5643658five period of Gastrodia elata0.710
SRR5643659five period of Gastrodia elata3.180
SRR5643660five period of Gastrodia elata1.980
SRR5643661five period of Gastrodia elata1.090
SRR5643662five period of Gastrodia elata1.570
SRR5643663five period of Gastrodia elata1.330
SRR5643664five period of Gastrodia elata1.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.890
SRR6049655Rhizomagastrodiae_C368-T10_good_155.050
SRR6049656Rhizomagastrodiae_C368-T07_good_115.050
SRR6049657Rhizomagastrodiae_C368-T07_good_122.560
SRR6049658Rhizomagastrodiae_C368-T04_good_128.420
SRR6049659Rhizomagastrodiae_C368-T04_good_126.990
SRR6049660Rhizomagastrodiae_C368-T01_good_115.660
SRR6049661Rhizomagastrodiae_C368-T04_good_115.210
SRR6049662Rhizomagastrodiae_C368-T01_good_19.930
SRR6049663Rhizomagastrodiae_C368-T01_good_14.700
SRR6049664Rhizomagastrodiae_C368-T10_good_125.470
SRR6049665Rhizomagastrodiae_C368-T10_good_125.470
SRP279888GastroGastrodia elata tuber 1.80
JuvenJuvenile tuber2.57
Mother_GastroMother tuber of Gastrodia elata 12.40
Mother_JuvenMother tuber of Juvenile 5.60