Detail information of GWHGAAEX011735/evm.TU.scaffold_4.37


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG18090Vacuolar protein sorting-associated protein
nrgi|743778705|ref|XP_010919819.1|0PREDICTED: uncharacterized protein LOC105043803 isoform X1 [Elaeis guineensis]
trEMBLtr|A0A061G3I9|A0A061G3I9_THECC0Pleckstrin (PH) domain-containing protein isoform 2 {ECO:0000313|EMBL:EOY24126.1}
TAIRAT1G480900calcium-dependent lipid-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000011663406868638-
Transcript Sequence

Network for GWHGAAEX011735

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12624.6Chorein_N21142.10E-31
PF16908.4VPS131333742.90E-62
PF16910.4VPS13_mid_rpt5597783.90E-31
PF00169.28PH7999068.30E-09
PF06101.10Vps62198721332.00E-11
PF06101.10Vps62221323598.60E-12
PF06650.11SHR-BD332834881.00E-07
PF06101.10Vps62422043073.10E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.520
SRR2545915Juvenile tuber22.760
SRP108465SRR5643513five period of Gastrodia elata8.790
SRR5643514five period of Gastrodia elata11.790
SRR5643515five period of Gastrodia elata10.490
SRR5643524five period of Gastrodia elata10.550
SRR5643525five period of Gastrodia elata5.960
SRR5643528five period of Gastrodia elata4.140
SRR5643658five period of Gastrodia elata4.500
SRR5643659five period of Gastrodia elata7.260
SRR5643660five period of Gastrodia elata9.910
SRR5643661five period of Gastrodia elata6.940
SRR5643662five period of Gastrodia elata7.360
SRR5643663five period of Gastrodia elata8.940
SRR5643664five period of Gastrodia elata9.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.870
SRR6049655Rhizomagastrodiae_C368-T10_good_110.250
SRR6049656Rhizomagastrodiae_C368-T07_good_111.330
SRR6049657Rhizomagastrodiae_C368-T07_good_18.600
SRR6049658Rhizomagastrodiae_C368-T04_good_113.980
SRR6049659Rhizomagastrodiae_C368-T04_good_112.950
SRR6049660Rhizomagastrodiae_C368-T01_good_110.830
SRR6049661Rhizomagastrodiae_C368-T04_good_112.610
SRR6049662Rhizomagastrodiae_C368-T01_good_18.930
SRR6049663Rhizomagastrodiae_C368-T01_good_111.410
SRR6049664Rhizomagastrodiae_C368-T10_good_112.770
SRR6049665Rhizomagastrodiae_C368-T10_good_112.770
SRP279888GastroGastrodia elata tuber 17.24
JuvenJuvenile tuber11.19
Mother_GastroMother tuber of Gastrodia elata 8.30
Mother_JuvenMother tuber of Juvenile 12.80