Detail information of GWHGAAEX011744/evm.TU.scaffold_4.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|37521914|ref|NP_925291.1|3.00E-58hypothetical protein glr2345 [Gloeobacter violaceus PCC 7421]
KOGKOG29147.00E-77Predicted haloacid-halidohydrolase and related hydrolases
nrgi|743827204|ref|XP_010933529.1|1.69E-126PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Elaeis guineensis]
Swissprottr|Q9ZVJ5|SGGP_ARATH2.00E-98Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
trEMBLtr|M0S2L0|M0S2L0_MUSAM3.00E-124Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P24030_001}
TAIRAT2G387407.00E-77Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001110809061089059-
Transcript Sequence

Network for GWHGAAEX011744

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13419.5HAD_2252086.20E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.310
SRR2545915Juvenile tuber52.460
SRP108465SRR5643513five period of Gastrodia elata62.300
SRR5643514five period of Gastrodia elata123.280
SRR5643515five period of Gastrodia elata97.440
SRR5643524five period of Gastrodia elata126.110
SRR5643525five period of Gastrodia elata95.630
SRR5643528five period of Gastrodia elata127.730
SRR5643658five period of Gastrodia elata110.610
SRR5643659five period of Gastrodia elata24.540
SRR5643660five period of Gastrodia elata24.550
SRR5643661five period of Gastrodia elata15.570
SRR5643662five period of Gastrodia elata32.860
SRR5643663five period of Gastrodia elata33.280
SRR5643664five period of Gastrodia elata23.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.110
SRR6049655Rhizomagastrodiae_C368-T10_good_152.260
SRR6049656Rhizomagastrodiae_C368-T07_good_132.860
SRR6049657Rhizomagastrodiae_C368-T07_good_116.480
SRR6049658Rhizomagastrodiae_C368-T04_good_19.260
SRR6049659Rhizomagastrodiae_C368-T04_good_110.560
SRR6049660Rhizomagastrodiae_C368-T01_good_131.110
SRR6049661Rhizomagastrodiae_C368-T04_good_117.200
SRR6049662Rhizomagastrodiae_C368-T01_good_196.950
SRR6049663Rhizomagastrodiae_C368-T01_good_164.850
SRR6049664Rhizomagastrodiae_C368-T10_good_162.800
SRR6049665Rhizomagastrodiae_C368-T10_good_162.800
SRP279888GastroGastrodia elata tuber 20.43
JuvenJuvenile tuber28.99
Mother_GastroMother tuber of Gastrodia elata 152.37
Mother_JuvenMother tuber of Juvenile 131.51