Detail information of GWHGAAEX011746/evm.TU.scaffold_4.49


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|698492366|ref|XP_009792536.1|1.51E-123PREDICTED: expansin-like B1 [Nicotiana sylvestris]
Swissprottr|Q850K7|EXLB1_ORYSJ2.00E-115Expansin-like B1 (Precursor)
trEMBLtr|A0A067LC12|A0A067LC12_JATCU1.00E-120Uncharacterized protein {ECO:0000313|EMBL:KDP45947.1}
TAIRAT4G384003.00E-43expansin-like A2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001110977301099815+
Transcript Sequence

Network for GWHGAAEX011746

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03330.17DPBB_1661275.20E-12
PF01357.20Pollen_allerg_11542202.40E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005576Cellular Componentextracellular region

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.760
SRR2545915Juvenile tuber19.470
SRP108465SRR5643513five period of Gastrodia elata63.610
SRR5643514five period of Gastrodia elata17.680
SRR5643515five period of Gastrodia elata155.840
SRR5643524five period of Gastrodia elata89.690
SRR5643525five period of Gastrodia elata18.140
SRR5643528five period of Gastrodia elata148.820
SRR5643658five period of Gastrodia elata37.830
SRR5643659five period of Gastrodia elata18.590
SRR5643660five period of Gastrodia elata8.080
SRR5643661five period of Gastrodia elata4.840
SRR5643662five period of Gastrodia elata3.630
SRR5643663five period of Gastrodia elata1.960
SRR5643664five period of Gastrodia elata0.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.980
SRR6049655Rhizomagastrodiae_C368-T10_good_14.220
SRR6049656Rhizomagastrodiae_C368-T07_good_112.880
SRR6049657Rhizomagastrodiae_C368-T07_good_18.250
SRR6049658Rhizomagastrodiae_C368-T04_good_113.510
SRR6049659Rhizomagastrodiae_C368-T04_good_112.640
SRR6049660Rhizomagastrodiae_C368-T01_good_113.910
SRR6049661Rhizomagastrodiae_C368-T04_good_115.560
SRR6049662Rhizomagastrodiae_C368-T01_good_11.780
SRR6049663Rhizomagastrodiae_C368-T01_good_12.060
SRR6049664Rhizomagastrodiae_C368-T10_good_11.120
SRR6049665Rhizomagastrodiae_C368-T10_good_11.120
SRP279888GastroGastrodia elata tuber 34.83
JuvenJuvenile tuber2.52
Mother_GastroMother tuber of Gastrodia elata 169.25
Mother_JuvenMother tuber of Juvenile 66.11