Detail information of GWHGAAEX011752/evm.TU.scaffold_4.55


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG15861.00E-125Protein required for fusion of vesicles in vesicular transport, alpha-SNAP
nrgi|743867026|ref|XP_010905207.1|2.57E-174PREDICTED: alpha-soluble NSF attachment protein-like [Elaeis guineensis]
Swissprottr|Q9M5P8|SNAA_SOLTU3.00E-142Alpha-soluble NSF attachment protein
trEMBLtr|B3TM20|B3TM20_ELAGV3.00E-175Alpha-soluble NSF attachment protein {ECO:0000313|EMBL:ACF06601.1}
TAIRAT3G561901.00E-125alpha-soluble NSF attachment protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001111538421169089-
Transcript Sequence

Network for GWHGAAEX011752

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14938.5SNAP72771.40E-109
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K15296NAPA, SNAPA, SEC17 Autophagy - yeast map04138
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:0006886Biological Processintracellular protein transport
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms152.240
SRR2545915Juvenile tuber116.160
SRP108465SRR5643513five period of Gastrodia elata93.860
SRR5643514five period of Gastrodia elata105.480
SRR5643515five period of Gastrodia elata98.770
SRR5643524five period of Gastrodia elata115.530
SRR5643525five period of Gastrodia elata141.500
SRR5643528five period of Gastrodia elata182.230
SRR5643658five period of Gastrodia elata162.060
SRR5643659five period of Gastrodia elata80.670
SRR5643660five period of Gastrodia elata84.720
SRR5643661five period of Gastrodia elata80.940
SRR5643662five period of Gastrodia elata84.350
SRR5643663five period of Gastrodia elata83.840
SRR5643664five period of Gastrodia elata78.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_191.710
SRR6049655Rhizomagastrodiae_C368-T10_good_186.240
SRR6049656Rhizomagastrodiae_C368-T07_good_1112.410
SRR6049657Rhizomagastrodiae_C368-T07_good_194.700
SRR6049658Rhizomagastrodiae_C368-T04_good_1135.960
SRR6049659Rhizomagastrodiae_C368-T04_good_1148.380
SRR6049660Rhizomagastrodiae_C368-T01_good_1109.160
SRR6049661Rhizomagastrodiae_C368-T04_good_1122.220
SRR6049662Rhizomagastrodiae_C368-T01_good_1121.010
SRR6049663Rhizomagastrodiae_C368-T01_good_1122.430
SRR6049664Rhizomagastrodiae_C368-T10_good_1118.210
SRR6049665Rhizomagastrodiae_C368-T10_good_1118.210
SRP279888GastroGastrodia elata tuber 136.61
JuvenJuvenile tuber87.10
Mother_GastroMother tuber of Gastrodia elata 194.14
Mother_JuvenMother tuber of Juvenile 163.43