Detail information of GWHGAAEX011753/evm.TU.scaffold_4.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|334146731|ref|YP_004509659.1|2.00E-12hypothetical protein PGTDC60_0936 [Porphyromonas gingivalis TDC60]
nrgi|695024398|ref|XP_009399412.1|3.10E-54PREDICTED: uncharacterized protein LOC103983832 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0SVC9|M0SVC9_MUSAM1.00E-54Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P03500_001}
TAIRAT4G179401.00E-40Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001111709111172799+
Transcript Sequence

Network for GWHGAAEX011753

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13176.5TPR_72042280.017
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.020
SRR2545915Juvenile tuber9.730
SRP108465SRR5643513five period of Gastrodia elata62.800
SRR5643514five period of Gastrodia elata39.850
SRR5643515five period of Gastrodia elata50.570
SRR5643524five period of Gastrodia elata50.450
SRR5643525five period of Gastrodia elata73.490
SRR5643528five period of Gastrodia elata77.900
SRR5643658five period of Gastrodia elata77.070
SRR5643659five period of Gastrodia elata48.290
SRR5643660five period of Gastrodia elata57.030
SRR5643661five period of Gastrodia elata40.780
SRR5643662five period of Gastrodia elata80.020
SRR5643663five period of Gastrodia elata65.570
SRR5643664five period of Gastrodia elata51.130
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.390
SRR6049655Rhizomagastrodiae_C368-T10_good_133.820
SRR6049656Rhizomagastrodiae_C368-T07_good_135.050
SRR6049657Rhizomagastrodiae_C368-T07_good_123.040
SRR6049658Rhizomagastrodiae_C368-T04_good_125.330
SRR6049659Rhizomagastrodiae_C368-T04_good_122.640
SRR6049660Rhizomagastrodiae_C368-T01_good_120.720
SRR6049661Rhizomagastrodiae_C368-T04_good_125.610
SRR6049662Rhizomagastrodiae_C368-T01_good_134.920
SRR6049663Rhizomagastrodiae_C368-T01_good_132.040
SRR6049664Rhizomagastrodiae_C368-T10_good_139.150
SRR6049665Rhizomagastrodiae_C368-T10_good_139.150
SRP279888GastroGastrodia elata tuber 63.62
JuvenJuvenile tuber78.20
Mother_GastroMother tuber of Gastrodia elata 48.30
Mother_JuvenMother tuber of Juvenile 56.55