Detail information of GWHGAAEX011756/evm.TU.scaffold_4.60
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|743879792|ref|XP_010908482.1| | 2.58E-167 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1 [Elaeis guineensis] |
| Swissprot | tr|Q84Y01|ITPK1_MAIZE | 9.00E-143 | Inositol-tetrakisphosphate 1-kinase 1 |
| trEMBL | tr|F6HT70|F6HT70_VITVI | 7.00E-153 | Inositol-tetrakisphosphate 1-kinase {ECO:0000256|PIRNR:PIRNR038186} |
| TAIR | AT5G16760 | 6.00E-128 | Inositol 1,3,4-trisphosphate 5/6-kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000011 | 1308723 | 1310355 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011756
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05770.10 | Ins134_P3_kin | 5 | 307 | 8.00E-128 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00913 | ITPK1 | Metabolic pathways | map01100 |
| Inositol phosphate metabolism | map00562 | ||
| Phosphatidylinositol signaling system | map04070 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0032957 | Biological Process | inositol trisphosphate metabolic process |
| GO:0000287 | Molecular Function | magnesium ion binding |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0052726 | Molecular Function | inositol-1,3,4-trisphosphate 5-kinase activity |
| GO:0052725 | Molecular Function | inositol-1,3,4-trisphosphate 6-kinase activity |
| GO:0047325 | Molecular Function | inositol tetrakisphosphate 1-kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 16.660 |
| SRR2545915 | Juvenile tuber | 10.960 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 31.720 |
| SRR5643514 | five period of Gastrodia elata | 23.760 | |
| SRR5643515 | five period of Gastrodia elata | 23.370 | |
| SRR5643524 | five period of Gastrodia elata | 26.310 | |
| SRR5643525 | five period of Gastrodia elata | 6.470 | |
| SRR5643528 | five period of Gastrodia elata | 9.920 | |
| SRR5643658 | five period of Gastrodia elata | 5.690 | |
| SRR5643659 | five period of Gastrodia elata | 14.940 | |
| SRR5643660 | five period of Gastrodia elata | 16.270 | |
| SRR5643661 | five period of Gastrodia elata | 14.590 | |
| SRR5643662 | five period of Gastrodia elata | 9.270 | |
| SRR5643663 | five period of Gastrodia elata | 7.340 | |
| SRR5643664 | five period of Gastrodia elata | 6.320 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 25.200 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 16.560 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 27.520 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 24.880 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 21.410 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 22.220 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 24.600 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 19.640 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 36.250 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 37.600 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 39.050 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 39.050 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 8.44 |
| Juven | Juvenile tuber | 25.99 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 47.05 | |
| Mother_Juven | Mother tuber of Juvenile | 26.48 |