Gene detail

Detail information of GWHGAAEX011758/evm.TU.scaffold_4.62

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|124027856\|ref\|YP_001013176.1\|	2.00E-09	acetyltransferase [Hyperthermus butylicus DSM 5456]
KOG	KOG3138	3.00E-85	Predicted N-acetyltransferase
nr	gi\|672125840\|ref\|XP_008786348.1\|	5.40E-127	PREDICTED: histone acetyltransferase MCC1-like [Phoenix dactylifera]
Swissprot	tr\|Q9M8T9\|MCC1_ARATH	1.00E-85	Histone acetyltransferase MCC1
trEMBL	tr\|M0SQY4\|M0SQY4_MUSAM	7.00E-116	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P21710_001}
TAIR	AT3G02980	3.00E-85	MEIOTIC CONTROL OF CROSSOVERS1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000011	1323783	1352145	-

Transcript Sequence
>GWHTAAEX011758 AAAACATAACACTCCTAATGGAATTTAGATTTCAATTCCCATCTAAATAGATTTATGAGGACCCAATTCAATAGACATTGGATTAATAGCAACTGTACTGGAATTTTTAAATCAAAGACCGTCCATTTCAAATCAAGAGGTAGCTGTTGGGCTGGATTCTGAAGTAACGAAGTATGAATCACGGCATGGGAAATGCTCTTCCGCCTCCCTGTCTGGGCAAAGTATGCGACCTGCGCATCCGAAGAAGTGTCGCTGATCAAGAGGTTTCTTCTCGTTAAATCCGAGGGATTTGAAATCACCAAAAGAGTGCCTTTTTCGGATAGCTGGGTGCAGATTCTTATATGAGCTGGTAAAAAACGCATCTGGCAGAAAGTTGAATCAACAAAGCCTAAACTTGTTAAGATAGCAGTATCTGTTGTGCTGATGTGGCATAGATGGAGGCATGCTTCTGTATGCACTTGTTTATCACAATTTTATTTCGTTCTGTGATCTGTGGGAAGACTTGCCATGTTTGACCCAGAAATTAGACACTGTCCTACAATTATTTATAGGCCAATTCGGCCATCTGATCTTCTAGCTCTTGAGCAGATCCATGCTTCATTATTTCCAATCAGGTATGAGAGAGATTTCTTTCTTAATGTTGTCAATGGCCGAGGCATTGTCTCTTGGGGCGCTGTTGACATTAGCAGGCCTGATGGCAATGTCGATGAGCTCGTCGGGTTTGTCACAACACGCATCATTTCAGTAAAAGAAAGTGAGATTGATGATTTAATTAGACATGACACTTCAAGGAAAGATCAAAATTTAGTGTATATATTGACACTTGGTGTTGTAGAACATTATAGGAACCTTGGCACAGCTTCTTCACTTATTCGGGAGGTTATAAAATATGCTTCAAGTATTTCTAGTTGCAGAGCAGTATATTTACATGTTATTGCTTACAATCAGCCAGCCATCCATTTCTACCAAAAGATGATGTTTAGTCTTGTAAGAAGGCTGCCAAATTTCTACTACATTAATGGACAGCATTATGACTCATTTTTATTTTTGTATCATGTAAATGGAGGTCAAACTCCATGCTCACCAATGGATATTGTAGCAGCATTTGCTGCATATTTGAGGGGTCTTATAAACATGCTTTCTGCAAAACTGTGGAAGGGTGGTGACAATAGGAAGTCAAGATGGTTCAGATCAAGTAAAGAAAGCCTCAGTCCTGGAGCTCTCTCGCAGAACAAGAGAATCCTTAATGCTGGAAATTCTATCTGCCAGAATGTTTAAATAATGAACTGCTTGCCTGGTATAGAGAGTTGGCTTTTGTTACTTCATTTATATATATATTTATATACATTTGAATCGTATCTGGCATTGCTGTAAGTGTTTCTCTTGACTTCAATCCTTCGAATGCTGGTAAGATGAATGTTTTCTGGAAGATTAGGTTTGAAAAGATTGCATCGAGGGGATGTTAAGCTCTTGAGGATGGTTTAGTGCAGTTGCAGAAGCTATAGAGAGCCAATGGTAAAGAATAAATGGATTCCGAGAGAGAGTGAGAGATGCTTGGATTATCTGTGTCAGAATGTGTTTGTGAGCCTGCTTCAGACTGTTTTTCTGGAGGGGGAATGTTCCTGATGCTGCCTTCAATTGCAAAATACTCTGCAAGGTGAAGTGATTCTATCTTCTGTAAAGAAAATCTAATTTACGTGTTTATCTGTTCTTATATCTATATATATAAGAACAGTTTTCCTCTCACATAATCACATTCCTCAGTCTTTAAAAATATGAATTATTCATTTAAACAACAATGGATCAGAAATAACTATTAAAAAAAGTAGATTTTTTTTGTTTATGATGAGGTTTGTGAGAATGAGACTTAGTGTTGTTGTTGATAATGATGAGATCTATGCTTATGCCTAGTGTTACTCTTAGAGAAGTTTCTATTGAGTGCCTTGCCAATAAGCTAGTTAATTAACAAGATGGGTTAGGTAATATCATGATATCCTTGCTCTTAGAGAAAACCATCTTGAATAAGGTAACTATGTGATCAGCAGGATTTCAACTTTTGACTTGCCAACACTTCAAATCCAACAGCTCAACTACTGAGCAGCCTTAGGTTTCTTCATTACTACTTGAGAGTTGGGGCCTTATTGTAATGATATTATAGTTTCTGTTGATTGATTGTCAAGAAAACCGATCATATGTTGGATGGAGATCTCATTTGTTGAGGCTCCTGAAAGTGATTAGTCCCACATCTTATTATAAAGTGATGTGTTCCGACACGAACACACGGGCACGACTTAACACGATTCCGAAATGACGGGTCACGCAGATTCAAGGGTTGGGTTTGGGTTGAAGATATAGAACGGTATAATATTGGAGAGCATGAGCATAACTCGAGTCTAACCTGATTCGATTTGTTGCCTTGCACATTCAGTTTTAAGTTTGTGTTGACTATTTGGATTTGGTTAATTTTGAGCGTCATTTAATGATTGTTTAGTCACACTTTGTTGAAC

Network for GWHGAAEX011758

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00583.24	Acetyltransf_1	53	156	5.90E-13

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008080	Molecular Function	N-acetyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	38.990
SRP064423	SRR2545915	Juvenile tuber	37.270
SRP108465	SRR5643513	five period of Gastrodia elata	8.950
	SRR5643514	five period of Gastrodia elata	9.480
	SRR5643515	five period of Gastrodia elata	10.150
	SRR5643524	five period of Gastrodia elata	10.930
	SRR5643525	five period of Gastrodia elata	18.270
	SRR5643528	five period of Gastrodia elata	15.910
	SRR5643658	five period of Gastrodia elata	16.620
	SRR5643659	five period of Gastrodia elata	17.430
	SRR5643660	five period of Gastrodia elata	21.530
	SRR5643661	five period of Gastrodia elata	20.590
	SRR5643662	five period of Gastrodia elata	21.310
	SRR5643663	five period of Gastrodia elata	19.610
	SRR5643664	five period of Gastrodia elata	20.930
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	13.220
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.710
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	12.220
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	12.910
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	13.800
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.520
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	12.790
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	10.950
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.080
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.160
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.800
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.800
SRP279888	Gastro	Gastrodia elata tuber	16.40
	Juven	Juvenile tuber	7.77
	Mother_Gastro	Mother tuber of Gastrodia elata	9.68
	Mother_Juven	Mother tuber of Juvenile	5.86