Detail information of GWHGAAEX011760/evm.TU.scaffold_4.64


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743779036|ref|XP_010919984.1|1.06E-90PREDICTED: probable transcription factor KAN2 isoform X2 [Elaeis guineensis]
Swissprottr|Q9C616|KAN2_ARATH3.00E-52Probable transcription factor KAN2
trEMBLtr|M0S8Z8|M0S8Z8_MUSAM7.00E-79Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P18070_001}
TAIRAT1G322401.00E-51Homeodomain-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001114390911447425-
Transcript Sequence

Network for GWHGAAEX011760

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding1311823.50E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGARP-G2-like

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.770
SRR2545915Juvenile tuber10.550
SRP108465SRR5643513five period of Gastrodia elata4.910
SRR5643514five period of Gastrodia elata1.740
SRR5643515five period of Gastrodia elata1.890
SRR5643524five period of Gastrodia elata3.310
SRR5643525five period of Gastrodia elata2.740
SRR5643528five period of Gastrodia elata0.560
SRR5643658five period of Gastrodia elata2.890
SRR5643659five period of Gastrodia elata3.210
SRR5643660five period of Gastrodia elata0.600
SRR5643661five period of Gastrodia elata2.450
SRR5643662five period of Gastrodia elata0.710
SRR5643663five period of Gastrodia elata1.090
SRR5643664five period of Gastrodia elata0.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.170
SRR6049655Rhizomagastrodiae_C368-T10_good_15.200
SRR6049656Rhizomagastrodiae_C368-T07_good_12.110
SRR6049657Rhizomagastrodiae_C368-T07_good_12.460
SRR6049658Rhizomagastrodiae_C368-T04_good_11.190
SRR6049659Rhizomagastrodiae_C368-T04_good_11.650
SRR6049660Rhizomagastrodiae_C368-T01_good_10.810
SRR6049661Rhizomagastrodiae_C368-T04_good_15.320
SRR6049662Rhizomagastrodiae_C368-T01_good_13.620
SRR6049663Rhizomagastrodiae_C368-T01_good_11.520
SRR6049664Rhizomagastrodiae_C368-T10_good_11.170
SRR6049665Rhizomagastrodiae_C368-T10_good_11.170
SRP279888GastroGastrodia elata tuber 1.49
JuvenJuvenile tuber1.16
Mother_GastroMother tuber of Gastrodia elata 0.74
Mother_JuvenMother tuber of Juvenile 1.98