Detail information of GWHGAAEX011764/evm.TU.scaffold_4.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00485.00E-65Transcription factor, Myb superfamily
nrgi|672160616|ref|XP_008800091.1|1.19E-70PREDICTED: myb-related protein Zm1-like [Phoenix dactylifera]
Swissprottr|Q7XBH4|MYB4_ORYSJ2.00E-68Myb-related protein Myb4
trEMBLtr|M0S900|M0S900_MUSAM5.00E-71Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P18090_001}
TAIRAT1G791805.00E-65myb domain protein 63

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001115670501568387+
Transcript Sequence

Network for GWHGAAEX011764

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding17649.40E-16
PF00249.30Myb_DNA-binding701155.60E-17
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.460
SRR2545915Juvenile tuber12.530
SRP108465SRR5643513five period of Gastrodia elata29.630
SRR5643514five period of Gastrodia elata17.960
SRR5643515five period of Gastrodia elata13.760
SRR5643524five period of Gastrodia elata26.000
SRR5643525five period of Gastrodia elata89.780
SRR5643528five period of Gastrodia elata110.010
SRR5643658five period of Gastrodia elata173.020
SRR5643659five period of Gastrodia elata1.730
SRR5643660five period of Gastrodia elata5.040
SRR5643661five period of Gastrodia elata3.680
SRR5643662five period of Gastrodia elata0.950
SRR5643663five period of Gastrodia elata2.110
SRR5643664five period of Gastrodia elata0.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.050
SRR6049655Rhizomagastrodiae_C368-T10_good_16.240
SRR6049656Rhizomagastrodiae_C368-T07_good_14.830
SRR6049657Rhizomagastrodiae_C368-T07_good_11.730
SRR6049658Rhizomagastrodiae_C368-T04_good_15.930
SRR6049659Rhizomagastrodiae_C368-T04_good_112.110
SRR6049660Rhizomagastrodiae_C368-T01_good_12.190
SRR6049661Rhizomagastrodiae_C368-T04_good_18.320
SRR6049662Rhizomagastrodiae_C368-T01_good_112.670
SRR6049663Rhizomagastrodiae_C368-T01_good_16.750
SRR6049664Rhizomagastrodiae_C368-T10_good_14.000
SRR6049665Rhizomagastrodiae_C368-T10_good_14.000
SRP279888GastroGastrodia elata tuber 8.98
JuvenJuvenile tuber2.94
Mother_GastroMother tuber of Gastrodia elata 541.15
Mother_JuvenMother tuber of Juvenile 328.22