Detail information of GWHGAAEX011768/evm.TU.scaffold_4.75


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10874.00E-177Cytosolic sorting protein GGA2/TOM1
nrgi|743779046|ref|XP_010919989.1|0PREDICTED: TOM1-like protein 2 [Elaeis guineensis]
trEMBLtr|M0S8Z6|M0S8Z6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P18050_001}
TAIRAT5G168804.00E-177Target of Myb protein 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001116173891654059+
Transcript Sequence

Network for GWHGAAEX011768

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00790.18VHS461782.90E-27
PF03127.13GAT2373115.70E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006886Biological Processintracellular protein transport

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms248.030
SRR2545915Juvenile tuber110.850
SRP108465SRR5643513five period of Gastrodia elata98.740
SRR5643514five period of Gastrodia elata107.090
SRR5643515five period of Gastrodia elata88.240
SRR5643524five period of Gastrodia elata99.770
SRR5643525five period of Gastrodia elata221.080
SRR5643528five period of Gastrodia elata259.420
SRR5643658five period of Gastrodia elata282.450
SRR5643659five period of Gastrodia elata49.290
SRR5643660five period of Gastrodia elata57.300
SRR5643661five period of Gastrodia elata55.970
SRR5643662five period of Gastrodia elata82.020
SRR5643663five period of Gastrodia elata73.110
SRR5643664five period of Gastrodia elata104.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_193.650
SRR6049655Rhizomagastrodiae_C368-T10_good_195.490
SRR6049656Rhizomagastrodiae_C368-T07_good_198.830
SRR6049657Rhizomagastrodiae_C368-T07_good_1103.030
SRR6049658Rhizomagastrodiae_C368-T04_good_1130.880
SRR6049659Rhizomagastrodiae_C368-T04_good_1141.260
SRR6049660Rhizomagastrodiae_C368-T01_good_1103.840
SRR6049661Rhizomagastrodiae_C368-T04_good_1108.360
SRR6049662Rhizomagastrodiae_C368-T01_good_187.680
SRR6049663Rhizomagastrodiae_C368-T01_good_1107.450
SRR6049664Rhizomagastrodiae_C368-T10_good_1114.150
SRR6049665Rhizomagastrodiae_C368-T10_good_1114.150
SRP279888GastroGastrodia elata tuber 135.47
JuvenJuvenile tuber84.88
Mother_GastroMother tuber of Gastrodia elata 119.20
Mother_JuvenMother tuber of Juvenile 110.15